Trachemys scripta elegans (red-eared slider): 117877281
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Entry
117877281 CDS
T07347
Name
(RefSeq) tumor necrosis factor receptor superfamily member 6-like
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04115
p53 signaling pathway
tst04210
Apoptosis
tst04217
Necroptosis
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117877281
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117877281
04217 Necroptosis
117877281
04115 p53 signaling pathway
117877281
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117877281
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tst04050
]
117877281
04090 CD molecules [BR:
tst04090
]
117877281
Cytokine receptors [BR:
tst04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117877281
CD molecules [BR:
tst04090
]
Proteins
117877281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
Peptidase_C12
DUF3042
Podoplanin
PepSY_TM
EphA2_TM
LapA_dom
Motif
Other DBs
NCBI-GeneID:
117877281
NCBI-ProteinID:
XP_034626133
LinkDB
All DBs
Position
4:104689713..104707662
Genome browser
AA seq
426 aa
AA seq
DB search
MGAGRFFLLLLLGVESSAISESRAEPSSRNCGDGEYLHQGYCCKYCPAGTYVSEHCKVPH
TEGICYPCTDGEDYTAHANGLDECIRCKLCKEDQVTVSTCTSTRNTECQCKPGYFCPTLG
CEMCYRCKSKCPEGKEIVQKCNATVDLECGHPPIGTATTAGCIAGVIVFIAFVAGCLLLF
KKRISYNKTNKENKDTEKDVESEDSTEIFFAPEMENANASASILEIQNSVQSPPVLAVNS
PDSALRNALPEDTSVAFSERSGLLNSENNSWEESYHRTAGYSAPVKPPDKPNFVFHPGQS
NGGMSVSRMVRDSEARPDIIVKELSQEALIESFYYFIKEVPPRNWNMFMRTHLTDNEIDK
TTFEHPKNIEEGYYQMLIIWRNKFGNEASIIKLLDSLWNIGLRRCHENIVNHLIGKDIIT
LLEAKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgggcgcttcttcctgctgctactgctgggggttgaatcatcagcaatatct
gagagtagagctgagccaagcagtcgcaactgtggtgatggagaatatctgcatcaaggc
tactgctgtaaatactgtcctgctggcacttatgttagtgaacactgcaaggttccacat
actgaaggaatttgttacccttgcacagatggagaggattatactgctcatgcaaatggc
ctagacgaatgcatacgatgtaaactgtgcaaagaagatcaagtaactgtgagcacctgc
acttcaacgagaaatactgaatgtcagtgcaagccaggctatttctgtcctactctaggc
tgtgagatgtgttacagatgcaagtcaaagtgtccagaagggaaagaaattgtacaaaaa
tgcaatgctacagttgacctggagtgtggccatcctcccatagggactgcgaccactgca
ggttgtattgctggggtcatcgtgttcattgcttttgtggctgggtgccttcttttattt
aagaaaaggatatcatataataaaacaaataaagaaaacaaagatacagaaaaagatgtg
gagtctgaggatagcactgaaattttctttgcaccagaaatggagaatgctaacgctagt
gcatccattttagagatccaaaactctgttcagagtccaccagttttagcagttaatagt
cctgattctgcactaagaaatgcgttgcctgaggataccagtgttgccttttctgaaaga
agtggcctactaaatagtgaaaacaactcatgggaagagtcttaccacaggactgcagga
tattcagcaccagtaaagcctccagacaagcccaattttgtctttcaccctggacagtca
aatggtgggatgtccgtatcccggatggtcagggattctgaagccaggcctgatataata
gttaaagagctttctcaagaagcattaattgaaagtttttattattttataaaagaagtg
ccaccacgcaactggaacatgtttatgagaactcatctaacagataatgaaattgataaa
acaacgtttgaacatccaaaaaatattgaagagggatattatcagatgctgatcatttgg
agaaacaaatttggaaatgaggcttccattattaaattattagatagcctatggaatata
ggacttagaaggtgtcatgaaaatatagtaaaccatttaataggtaaggatattataact
ctgctagaggccaaagactaa
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