Trachemys scripta elegans (red-eared slider): 117877425
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Entry
117877425 CDS
T07347
Symbol
FADS2
Name
(RefSeq) acyl-CoA 6-desaturase isoform X1
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00592
alpha-Linolenic acid metabolism
tst01040
Biosynthesis of unsaturated fatty acids
tst01100
Metabolic pathways
tst01212
Fatty acid metabolism
tst03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
117877425 (FADS2)
01040 Biosynthesis of unsaturated fatty acids
117877425 (FADS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117877425 (FADS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tst01004
]
117877425 (FADS2)
Enzymes [BR:
tst01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
117877425 (FADS2)
Lipid biosynthesis proteins [BR:
tst01004
]
Desaturase
Front-end
117877425 (FADS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
EpuA
Motif
Other DBs
NCBI-GeneID:
117877425
NCBI-ProteinID:
XP_034626431
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Position
4:complement(115801114..115843011)
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AA seq
444 aa
AA seq
DB search
MGKGGEKGEEAGEREAQSRLYSWEEIQRHNLRTDKWLVIERKVYNITTWAARHPGGPRVI
SHYAGEDATDAFWAFHLNPSFVQKFLKPLLIGELAPGEPSQDRGKNPQLVDDFRALRKTA
EDMNLFKADPLFFSLYLGHIIMMEALAWLLVSYYGTGWITTFILSCILATSQAQAGWLQH
DFGHLSVFKKSKWNHIVHKFVIGHLKGASANWWNHRHFQHHAKPNIFKKDPDVNMLHIFV
LGDSQPVEYGKKKLKYLPYNHQHEYFFLVFPPLLIPVYFQMQIIMTMIRRRFWADLAWAF
SYYMRYFIMYIPFYGVLGSLFLLTFVRFLESHWFVWVTQMNHIPMEIDCEKHRDWLSAQL
AATCNIEQSFFNDWFTGHLNFQIEHHLFPMMPRHNYCKIAPLVKSLCTKYGVHYEEKSLG
KAFIDIVGSLKKSGHLWLDAYLHK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaggcggggagaaaggcgaggaggcaggggagcgcgaggcgcagagccggctc
tacagctgggaggagatccagcggcacaacctgcggacggacaagtggttggtgatcgag
cggaaggtttataacatcaccacgtgggcagccaggcacccgggcggcccccgggtgatc
agccactacgccggcgaagatgccacggatgctttctgggcctttcacctcaaccccagc
tttgtgcaaaagtttctcaagccattactgattggagagctcgccccaggggaacctagc
caggaccgaggcaaaaacccccagctggtggatgatttccgggccctgagaaagacagca
gaggatatgaatttgttcaaagcagatcccttatttttctccctttacctgggtcacatc
atcatgatggaagctttggcttggttactagtttcatactatgggaccggctggatcaca
acctttatcctttcctgcatccttgcaacctcccaggcccaggctgggtggctacagcat
gactttggacacctctctgtctttaagaagtctaaatggaaccatatcgtccacaagttt
gtcatcgggcacctgaagggtgcctcagcaaactggtggaatcatcgtcacttccaacat
catgccaaacccaacatcttcaagaaggacccagatgtgaacatgctgcatatttttgtc
ctgggagattctcagcccgttgagtatggcaagaagaagttgaaatacctaccttacaac
caccagcatgagtacttcttcctagttttcccacctctcctcatccccgtgtacttccaa
atgcaaatcatcatgaccatgatcagacgcaggttctgggcggacctggcttgggccttc
agttattacatgcgctatttcatcatgtacatccctttctatggagttctgggatccctg
tttctcctcacctttgtcaggtttctggagagtcactggtttgtgtgggtcacacagatg
aaccatattccaatggaaattgactgtgagaagcacagagactggctcagcgctcagttg
gcagctacctgtaatatcgagcagtcctttttcaatgactggttcaccgggcacctgaac
ttccaaatcgagcaccacctgtttcccatgatgccacgacacaattactgcaagattgcc
ccactggtgaagtcattgtgcaccaagtacggagtccactatgaagagaaatctctcggc
aaggcattcatagacattgttgggtctctaaagaaatctggacatctctggttggatgcc
tacctccataaatga
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