Trachemys scripta elegans (red-eared slider): 117877481
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Entry
117877481 CDS
T07347
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1 isoform X1
KO
K12401
AP-4 complex subunit beta-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117877481 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117877481 (AP4B1)
Membrane trafficking [BR:
tst04131
]
Endosome - Golgi transport
Others
AP-4 complex
117877481 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT
HEAT_2
PDS5
AP4E_app_platf
XMAP215_CLASP_TOG
EntA_Immun
Motif
Other DBs
NCBI-GeneID:
117877481
NCBI-ProteinID:
XP_034626513
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All DBs
Position
4:complement(120006969..120017748)
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AA seq
740 aa
AA seq
DB search
MPYWGADDAVAELRRALSNRHVQADRLRYRNVLLRVIRRMTQGVDVSGVFMEMVKASATG
DIVQKKLVYLYMCTYASLQPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRMPGIQEY
IQQPVLNGLRDKASYVRRVAVLGCAKMQKLQGDTEVDGVMVNELYSLLRDQDPIVVVNCL
RALEEILRREGGVVINKPIAHHLLKRMSDLDQWGQSEVLAFLLRYKPRSEEELFDILSLL
DGSLKSTSPSVVMAATKLFLVLAKDFPQVQTDVLVRVKGPLLAACTSESRELCFAALCHV
RQILGSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCELVNDENVQQVLEELKSYCTDVS
VELAQGAIFAIGSIARTYTEQCVGILTELLGLKQEHITSAVVQAFRDLVWLCPQCTEAVC
QALPSCEEAMQDSEGKQALIWLLGVHGERVPNAPYVLEDFVENVRSETFPAVKMELLTAL
VRLFLFCPAECQDILGRLLYYCIEEETDMVVRDRGLFYYRLLQAGVEEAKQVLCSPKSDP
SLGLLEDQAERPVNKWASEFNTLVPIYGKARWAVVTANWATEPRCRGFPFAAPMTAGTES
LISEGNKEVLQVHSDSTGLTLIPKAYLTAEQFEKTWLSLDVNCQQALPWHGAAHPDTIQT
ALQVVHIQTIAMSKAGAQPWKAYLSAQDESGCLFLTELLLETENSDMQVSVKQSEERTEA
LQHFISVLRTVMGTVLGLKS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccgtactggggcgcggacgatgccgtggcggagctgcgccgagccctgtccaaccgc
cacgtgcaggccgaccggctgcgctaccgcaacgtgctgctgcgcgtgatccggcgcatg
acccagggcgtggatgtgtccggggttttcatggagatggtgaaggccagtgccacgggg
gacatcgtgcagaagaagctggtctacttgtacatgtgcacgtacgcctctctgcagccc
gacctggcgctgctggccatcaacaccctgtgcaaagactgctccgaccccaaccccatg
gtcagaggcctcgccctccgcagcatgtgcagcctcaggatgcctggcatacaggagtac
atccagcagcccgttctgaatggtctgcgagacaaggcgtcctatgtgaggagagtagct
gttcttggctgtgcaaagatgcagaaactccaaggtgacaccgaagtggatggcgtgatg
gtgaatgagctatacagtttgcttcgtgaccaggatcccattgtagtggtgaattgtctg
agggctctagaagagattctgaggcgggaaggaggagttgtcatcaacaagcccatagcc
catcaccttctcaaaagaatgtctgacttagaccagtggggacagagtgaggtgctggcc
ttcctgctgcgctacaaaccccgcagtgaggaagaactcttcgacatcctcagcttacta
gatgggtccctcaagagcaccagccccagtgttgtgatggcagccaccaaactctttctg
gtgttggccaaggacttcccacaggtacagacagatgtactagttagagtgaaggggcca
ctgctggcggcctgcacctccgagagccgggagctctgcttcgctgccctgtgtcatgtg
cgccagatcctgggaagcctgcctggccactttagcagccattacaagaagtttttctgt
tcctactcggagccccattacattaaatgtcagaagatggaagtgttgtgtgaactggtg
aatgatgagaacgtgcagcaggtgctggaggagctgaagagttactgcactgatgtgtca
gtcgagcttgcccagggggccatcttcgccataggcagcattgccaggacgtacacagag
cagtgtgtggggattctaacggagctcctagggctgaagcaagaacatatcacttcagct
gtggtgcaggctttccgggacctggtgtggctttgtccccagtgcaccgaggctgtgtgc
caggctctgcccagctgtgaggaggccatgcaggacagcgagggcaagcaagcgctgatc
tggctcctgggagtgcatggggagagagttcccaatgctccctacgttttggaggacttt
gtcgagaatgtgagatcggagacgtttccagcagtgaagatggagttgctgacagctttg
gtccgactcttcctgttttgtcctgccgaatgccaggacatacttgggcgactgctctat
tactgcatagaggaagagactgatatggtggtacgggaccgggggctgttctactatcgt
ctcttacaagctggcgtggaagaagcgaagcaagtgctgtgcagccccaagtctgatccc
tctctgggactcctggaggatcaggcagagcgacctgtgaacaaatgggcttcagagttt
aacacgttggtgcccatatatgggaaagcgcgctgggcagttgtcactgctaactgggca
acggagccgcgctgcagaggctttccctttgctgctccgatgactgcaggaacagagtca
ctgatttcagaagggaataaggaagttctccaggttcattccgactcgactggcttgact
ttaatccccaaggcatacctgactgcagagcagtttgagaagacctggctgagtctggat
gtgaactgccagcaggctctgccctggcatggagctgctcacccagacaccatacagact
gcgcttcaggttgtccacatccagactattgctatgagcaaagctggtgcccagccatgg
aaagcctatctcagtgcccaggatgaatctggctgtctcttcctaacagaactgctgctt
gagaccgagaactccgacatgcaggtttcagtgaagcagagcgaggagaggactgaggcg
ctgcaacactttatctcagtgttaagaactgtaatggggacagtcctagggctgaaatcc
tga
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