Trachemys scripta elegans (red-eared slider): 117878263
Help
Entry
117878263 CDS
T07347
Symbol
CEP290
Name
(RefSeq) centrosomal protein of 290 kDa isoform X1
KO
K16533
centrosomal protein CEP290
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117878263 (CEP290)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117878263 (CEP290)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
117878263 (CEP290)
Cilium and associated proteins [BR:
tst03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
117878263 (CEP290)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
LSU
Motif
Other DBs
NCBI-GeneID:
117878263
NCBI-ProteinID:
XP_034628260
LinkDB
All DBs
Position
1:complement(76291460..76405299)
Genome browser
AA seq
2462 aa
AA seq
DB search
MPPNLDWKKLMRIDADDLPRQEELADSLLVTVSKVEGNDLKDENPEHVVHLFKITQSLMK
MKAQEVELALEEVEKAGEEQAKFENQLKAKVMKLENELEMAQRAAGGRDTRFLRDEIRQL
EKQLEQKDRELTDMEKELEKEKKVNEQLALRNEDAENENSKLRRENEQLRQDVIDYQRQI
DSQKEMHMSRRGDESDYRSQLSKKNFELVQYLDEIQSLTETNEKLEAQNQEMRKNLEESV
QEMEKMTDEYNKMKLIVQQSDIVMDQLRKEKEQYKFQIQELTDQLKAKNEEDDPLMAAVN
AKVEEWKRILASKDDEIIEYQQMLFNLREKLKMAQLDADKNNVMALQQGVQERDSQIRLL
TEQIEQYTKEMEKNALIIEDLKNELQKDKGLSSLAQQNRIGEIQEKLQLLEQRTKEAERV
AELAESDAREKDKELIEALKRMRDYETGIYGLEDAIAEIKDLKKQIKIRDHETEGLIKEV
NKLELKINDFLDENEDLRERLGLDPKTMIDLTEFKNSKALKQQQYRAENQILLKEIERLE
EERLALKQQIRKLAQEKGKRAAMLGLDADDLQLIDSFTEDLKTKKGKSDFMSTVNVDEVK
AKNEYLAKELNEREKDLERNRTAIAKFQSKLKELSEENKQLEQGMKEILQAVREMQKDPS
VKGGETALMIPSLERLVNAIESKNAEGIFDANLHLKAQVDQLTGRNEELRQELKGSRKEA
TNFSNQLANANIKIAQLKDEVCLLRQLEGANIVFRAVNRPEGMTPSNANIVNSQNEYLIH
LLQELENKEQLLKKLEEAVEEYKRKFAVIRHQQGLLYKEYQSEKESWQTESEKMKEEKKK
LEDQKEQDAMKIKEYNNLLDALQLGTDETKKLLAENSRKMTVLRVNERSLTRQYTTLLEM
ERHLRKENEKQKAELTSMETAVGEKIGHLQRFKEMASFKIAALQKGLDDSVPLSELELAN
KQYNELTAKYRDMLQKDNLLVQRTTNLEHMESENASLKEQINSLNKELEITKEKLHTVEQ
AWDQTTKLGGDNAMDKATKAITNSEIVSISKKITVLEMKELNERQRAEHSHRMYEHLRNT
LKQVEERNFELETKFAELTKINLEAQKVEQALRDELTNSVSKSISDADRRKIMELEKSEM
ELKIEVSKLRELSDIAKMQVAALDARQQSREKEVESLRMQVLDYQAQSDEKALIAKLHQH
IVALQISETTAVGKLEALTMKLQKMEIYNLRLEQKLDDKEQGLYYARLEGRNRAKHLRQT
VQSLRRQFSGALPLAQQEKFSKTMIQLQNDKLKIMEEVQRAQEERRNIENRAMEMELKVK
GLEELIGTLKDTRGAQKVIEWHMKMEELRLQELKLNRELVKQKEEIKYLNNIISEYERTI
SNLEEEIVQQSKFYEERQMAWDQREVELERQLDVYDRQQNEILSTARKFEDATGSVPDPS
LPLPQQLELALRKIRENVRTILETRATCKLLEEKLKEKETALWKAEQNVLSRDRVINELR
LRLPATAEREKIIAELGRKEDDPEYHHALKVAHQTITNMQARLNQKEEVLKKYQHLLAKA
REEQEEISKKHEEDLRVLHQKLDFQADNSLIKFKQTALELMKKPSLSVPTNKHFIRLAEM
EQTVAEQDNSLALLLGRLKKTSYDLEKQKQLTLLKIREFENVKAQLEEKHVAEVKKLKDE
ANELRNLLSQKEKELLQVKTELEAQKEANNRAPTTTMKNLVERLKNQLALKEKQQKALSK
ALLELRAEMTANAEQQIISVASQKEAYMNVQQIVDKQTKELTIHIEELNEQLTKFKDALK
VSKTRERSLLDEMDDLNQELQKKQKAITKGLREKEETENENEELKKRIKRLTNSIQSKAD
EQKFIDELQKKIKKLESEVEKSEEVEKKSVKEDKSSREEIARWEEGKKWQARMEGMRNKL
KEKEKEMDTLTKQFNTLKELYSKADKEKIALQKKLKTSGITVDHVVGVRASESEKELEEL
RKRNIDLENEIAHMRTQQALPRDSVVEELHLKNRYLQEKLHALERQFSRDTFSRPSTSGI
GSDDQCQKQQELQKENLRLSSENVELRFQLEQANKDLPRLKDQVGDLKEMCELLKREKAE
VERKLGSVRGSGRSGKTIPELEKTIGLMKKVVEKVQRENEDLKKAPGVVSNEKLVSLELE
NERLKSEMEKMKLHLGGQLSMRYESKTRGMEKIIAENERLRKELKKEADTAEKLRIAKNN
IEIINEKLTVELEETVKRLNLAESRGPQLEGADSKSWKSIVVTRMYETKMKELETDVAKK
NQSITDLKQLLREATEREHKIEKNTQDLKEQIELLKHFPEGASTEQGLARELQLLRLTNN
RLEKEKAELAHQVEAYRHQTGINASEGSAAEKGRIDKLMVDVVDLQTQLQASDLEKKQLT
EEIKHLKKELDNFDPSFFEEIEDLKYNYNEEVKKNIILEEKLKKLSEQFGVQVDIPANVS
ID
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaatttagattggaagaagcttatgagaattgatgctgatgatctgcctcgt
caagaagaactggcagatagtttgctggtgactgtatccaaggttgaaggaaatgactta
aaagatgaaaatcctgaacatgtggtacatctttttaaaattacacagtcactaatgaag
atgaaagcccaagaggtagagctggctttagaagaagttgaaaaagctggggaagagcaa
gccaaatttgaaaatcaattaaaagcaaaggttatgaaactagaaaatgaattagagatg
gcacagcgagctgctggtggtcgtgatactcggtttttgcgtgatgagatccgtcagctg
gaaaagcagttggaacaaaaagacagagaattaacagatatggaaaaggagctagaaaaa
gagaagaaagttaatgaacagcttgctcttcgaaacgaggatgcagaaaatgaaaacagc
aagttaagaagagagaatgaacaacttcgccaggatgtaattgactaccagagacaaata
gattcacaaaaggaaatgcatatgtcacgtagaggagatgagtccgattacagatctcaa
ttatccaaaaagaactttgagcttgtccaatatctggatgaaattcagagtttgaccgaa
actaatgagaaattagaagctcaaaaccaggaaatgaggaagaacttggaagaatcagtg
caggaaatggagaagatgactgatgagtataacaaaatgaaacttattgtgcagcagtct
gatattgttatggaccaattaagaaaggaaaaggaacagtataagtttcagatacaggaa
ctaacagaccaacttaaagcaaaaaatgaagaagatgatcccctcatggcagctgtaaat
gcaaaagttgaagaatggaagagaatcttggcttctaaagatgatgaaatcatagaatat
cagcagatgttgtttaacttgagagagaaactgaaaatggcccaacttgatgcagacaaa
aacaacgttatggcactccagcagggggtgcaagaacgagacagtcagatcaggttgctc
actgagcaaattgaacaatatacaaaagaaatggaaaaaaatgcattgattattgaggat
ttgaaaaatgaactccaaaaagataaaggtctctcatctcttgctcagcagaatcgtatt
ggagaaatacaggaaaaattgcaactgctggaacagagaactaaagaggctgagagagtg
gcagaattagcagagtctgatgctagggaaaaggacaaagaactcattgaggctctgaag
cgaatgagagactatgaaacggggatatatggtttggaagatgctattgctgaaataaag
gatttaaaaaagcagattaaaataagagatcatgagactgaaggattgattaaggaagtg
aacaaacttgaacttaaaatcaatgattttcttgatgaaaatgaagacctcagggaacgc
ttaggtcttgatccaaaaacaatgatagatttaactgaatttaaaaacagcaaggcacta
aaacagcagcagtacagagctgaaaaccagatccttttaaaagagattgaaagactggaa
gaagaaagacttgcactgaaacaacagattcgtaaactggctcaggagaaaggaaaaaga
gcagcaatgttaggattggatgcagatgacctgcagctgattgatagctttactgaagat
ctgaagacaaaaaaagggaaatcagacttcatgagcacagttaatgttgatgaagttaaa
gcaaagaatgaataccttgcaaaagaattaaatgagagagagaaagatttggaacggaac
aggactgcgatagccaaatttcaatctaaattaaaagaattatcagaagaaaacaagcag
cttgagcaaggaatgaaagagattttacaagctgtcagggaaatgcagaaggatcctagt
gtgaaaggaggagaaacggccttaatgatccctagtctggagcgattagtaaatgcaatc
gaatcaaagaatgcagaaggaatatttgatgccaatttgcatttgaaagctcaagttgac
cagcttacggggcgaaatgaagaattgaggcaggagctgaaaggatctcgaaaagaggca
acaaatttctctaaccagttagcaaatgctaatataaagattgcacaacttaaagatgaa
gtttgtttgttacgtcaattggaaggtgccaatatagtattcagagcagtaaaccgtcca
gaagggatgactccttcaaatgctaatatagttaattctcagaacgaatatttaatacat
cttttacaggaactagaaaataaagaacagttacttaagaaattagaagaagcagtagaa
gaatataagcgaaaatttgcagtaattcgccatcaacaaggcttgctatataaggaatat
caaagtgaaaaagaaagttggcaaacagaatctgaaaaaatgaaagaagaaaagaagaag
ctagaagatcagaaagaacaggatgctatgaaaataaaggaatacaataatttactggat
gcacttcagctgggtacggatgaaaccaaaaaactacttgcagaaaacagtagaaaaatg
accgtcttgcgagtgaacgaacggtcactgacaagacaatatacaactttacttgaaatg
gaacggcatcttagaaaagaaaatgagaaacaaaaggctgaactaacatcaatggagact
gcagttggagaaaagattggacacttgcagcgattcaaggaaatggcaagctttaagatt
gcagctctgcaaaaaggtttggatgacagtgtgcctctgtctgagctagaactggctaat
aagcagtataatgagttaactgctaaatacagggatatgctacaaaaagataacttgctt
gtccagagaacaactaacttggagcacatggagagcgagaatgcatccttgaaggaacag
ataaattcattaaataaagaacttgagatcacaaaagaaaaacttcacactgtagaacaa
gcttgggaccaaacaactaagttggggggtgacaatgccatggacaaggccacaaaagca
attaccaacagtgagattgtttctatttctaagaaaatcactgtgctggaaatgaaggaa
ctaaatgaaagacagagagctgaacactcgcatcgaatgtatgaacacttaaggaacact
ttaaagcaagtggaagaacgtaactttgaactggaaactaagtttgctgagcttactaaa
atcaacctcgaggcacaaaaggtggaacaggcattaagagatgaactgacaaacagtgtg
agtaaatcaataagtgatgcggatagacgaaaaatcatggagttagagaagagtgaaatg
gaactgaagattgaggtatcaaagttaagggaactttctgatattgccaaaatgcaagtt
gcagctctggatgcacggcagcaatccagagagaaggaagtggaatcccttcgaatgcaa
gttttagactatcaggcgcagtcagatgaaaaagctcttattgcaaaattacaccagcat
atcgtagctcttcagattagtgagaccactgctgtgggcaagctagaagcacttacaatg
aaactgcaaaagatggagatttataatctacgcttagaacagaagcttgacgacaaagag
cagggattatactatgcccgactagaagggagaaatagagccaaacatctacgccagact
gtgcagtctctgcggcgacagtttagtggtgctctgcccttggcacaacaggagaaattc
tctaaaaccatgattcagctacagaatgacaaattaaaaatcatggaagaagtccagcgt
gcccaggaagagcgtcgaaacatagagaacagagcaatggagatggaattaaaagtaaaa
ggtttagaagagttaataggcacattgaaagatacaagaggagcccaaaaggtaattgaa
tggcatatgaaaatggaagaacttcgtctccaggaacttaaactgaatcgagagttagtc
aaacaaaaagaagagattaaatatttgaataatatcatttctgaatatgagcgtacaatc
agcaatctggaagaagaaattgtacagcagagcaagttttatgaagagcggcagatggct
tgggatcagagagaagtagagttagaacgtcaactagacgtatatgaccgtcagcaaaat
gaaatacttagtactgctcgaaagtttgaagatgctacaggttcggttccagatcctagt
ttgccccttccacagcagcttgagctagctttgaggaaaattagggagaatgttcgaaca
atcttagaaacgcgggcaacctgcaaattattagaagagaaactgaaagagaaagaaact
gcactctggaaagcagaacaaaatgttttatcaagagacagagttataaatgaactaagg
cttcgattacctgcaacagcagaaagagagaagataatagctgagctaggtagaaaagaa
gatgatccagaataccatcatgccctgaaagttgcccatcaaaccattacaaatatgcaa
gcaagactaaatcaaaaggaagaagtgttgaagaagtatcagcatctccttgcaaaagct
agagaggagcaagaggaaatctcaaagaaacatgaagaagacctccgggttttacatcag
aagctagattttcaagctgataattcacttattaaattcaaacaaactgctttggagtta
atgaaaaaaccttctttatcagttcccaccaacaaacatttcattcgtctggctgagatg
gagcaaacagtagcagaacaggacaactctcttgctttacttctaggcaggttaaagaaa
acatcatatgatttggagaaacaaaaacaacttactttattaaaaatcagagagtttgaa
aacgtcaaggctcagcttgaagaaaagcatgtagctgaagtgaaaaaactgaaagatgaa
gcaaatgaattgagaaacctgttgtcgcagaaagagaaggaattgctgcaagtaaaaact
gaattagaggcccaaaaagaagcaaataatagagcgccaacaactacaatgaaaaaccta
gtggaaaggttgaagaaccagttagccttaaaagagaaacaacagaaagctttgagtaaa
gcacttctggagctccgagcagaaatgactgctaatgctgaacagcagattatttctgta
gcatcacaaaaagaggcgtacatgaatgttcagcagattgttgacaaacaaacaaaggag
ctcacgattcatatagaggaattaaatgagcaacttacaaaattcaaagatgcccttaaa
gtaagtaaaactagagagcgctctttgttagatgagatggatgatttaaaccaagaactt
caaaaaaagcaaaaagccattactaaagggctaagagaaaaagaagaaacggaaaatgaa
aatgaagaactgaaaaagcggataaaaagactaacaaacagcattcagagcaaagctgat
gaacaaaaattcatcgatgaacttcagaaaaaaattaaaaagcttgaaagtgaagttgaa
aagagtgaggaggtagaaaagaaaagtgtaaaagaagacaagagctctagggaagaaata
gctaggtgggaagagggtaaaaaatggcaagccagaatggaagggatgcggaacaaacta
aaagaaaaggagaaagaaatggacactttaacaaaacagttcaatacattaaaggaactt
tattccaaagctgataaagagaaaattgctttacaaaagaaactcaagaccagtggtatt
actgttgaccatgttgtgggagtacgggcatcagagtcagagaaagagctggaagaacta
agaaaacggaatatagacttagaaaatgaaattgctcatatgagaacacaacaggctctc
ccacgagattctgtggtagaagagttacatttaaaaaatcgatatttgcaggaaaagctt
catgcattggagagacagttttcaagagacacattttcaagaccttcgacgtcaggaata
ggatcagatgatcagtgtcaaaaacaacaggagcttcagaaagaaaatttgaggttatca
tctgaaaatgttgaactaagattccagctagagcaggctaataaagatctgccaagatta
aaggaccaagtaggtgacttgaaagaaatgtgtgagcttctcaaaagagagaaagcggaa
gtcgagcgcaagctaggcagtgttagagggtctggtagaagtggaaagaccattccagaa
ttagaaaaaaccattggtttgatgaaaaaggttgtagagaaagtgcagagagaaaatgaa
gatctgaaaaaggccccaggagttgtctctaatgaaaaactagttagccttgaacttgaa
aatgagaggctaaagtctgaaatggaaaaaatgaaacttcatctgggtggccagctcagt
atgcgttatgaatcaaaaaccagaggcatggaaaaaatcattgctgaaaatgagaggcta
cgtaaagagctgaaaaaagaagctgacactgcagaaaagctacgaatagcaaagaataac
atagagataataaatgagaagttgactgtggaactggaggagactgttaagaggttaaac
cttgctgaaagcagaggtccacaacttgaaggagctgacagcaaaagctggaaatcaatt
gttgtaacaaggatgtatgaaactaagatgaaagaactggaaactgatgttgccaaaaaa
aatcaaagcattactgatcttaaacagctactgcgagaggcaacagagcgtgaacacaag
attgaaaaaaacacacaggacttaaaggaacaaattgagcttctcaaacactttcctgaa
ggtgctagcacagagcaaggtcttgctagagagcttcagcttctcagattaaccaataat
cggctggagaaggaaaaagcagaactagctcaccaggtggaggcttaccgacatcaaaca
ggcatcaatgcaagcgaaggctctgcagccgagaaaggcagaattgacaaattaatggta
gatgtagtagatctccagacacagctgcaagcctcagatctggaaaaaaagcaacttaca
gaagaaatcaaacacctgaaaaaagaactggataactttgacccttccttttttgaagaa
attgaggatctgaaatacaactacaatgaagaagtaaaaaaaaatattatcttggaggag
aaattaaagaagctttctgaacagtttggtgttcaagtggatattccagctaacgtgtct
attgattaa
DBGET
integrated database retrieval system
