Trachemys scripta elegans (red-eared slider): 117878440
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Entry
117878440 CDS
T07347
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
tst04620
Toll-like receptor signaling pathway
tst05132
Salmonella infection
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117878440
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117878440
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117878440
09171 Infectious disease: bacterial
05132 Salmonella infection
117878440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117878440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117878440
04054 Pattern recognition receptors [BR:
tst04054
]
117878440
04090 CD molecules [BR:
tst04090
]
117878440
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117878440
Membrane trafficking [BR:
tst04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117878440
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of breast milk
117878440
Pattern recognition receptors [BR:
tst04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117878440
CD molecules [BR:
tst04090
]
Proteins
117878440
Glycosaminoglycan binding proteins [BR:
tst00536
]
Hyaluronan
Cell surface receptors
117878440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_1
LRR_9
LRR_LRWD1
LRR_6
LRRCT
LRR_Zer-1
DUF1068
Motif
Other DBs
NCBI-GeneID:
117878440
NCBI-ProteinID:
XP_034628519
LinkDB
All DBs
Position
5:58594625..58602401
Genome browser
AA seq
783 aa
AA seq
DB search
MSNQLWKGWVIYMVITANLSEEKTMMQMCPSCDATHFCDCSSMNLSTIPSGLTTDITGLN
LSYNSIKYVRETDLLVGVNLRVLLLQFNQIWTIDKESFIFLGKLEHLDLSNNKLTHLSPI
WFRHLFSLQHLNIQGNLYTTLGENPLFSNLKNLRYLHLGNNNSFSAIRKQDFDGITVLEQ
LEIDGQRLRQYESGSLITVNINHIIININDVQVLSVMVEDFIHSVICLELRHIAFNTANE
SSLLEPMSHSVMEKFVLKNVLFTDASIDKMLNILVHAEQLLELELDNSILQGTGHWHEPI
KIKRRSPMEVVTIQRLTIEKFYLFSDLSSLKNLVGNITKITVVNTKVFLVPCNISKHFSS
LLYLDLSENLLADPNLEHSSCDGAWPLLQTFNLSQNTLGDLQMTARSLSHLKHLTHLDIS
RNNFGEIPESCQWPENLKYLNISGTQIPKLTTCIPQTLEVLDVSSNNLNDFRLKLPRLKE
LYVSKNKLKTLPDAPFIPNLVALRISRNKLTSFSKEEFGSFRKMETLDAGDNNFICSCEF
LSFIQYQEGIANVLANWPENYICDSPSSVRGQQVKSARLSLFECHRTLAVSLICILVVLV
ILLIVILGYKLHVIWYMKMTWAWLQAKRKPKKSHNHDFCYDAFVSYSERDSEWVENLMVQ
ELENAIPPFKLCLHKRDFVPGKWIIDNIIDSIEKSHKTLFVLSEHFVQSEWCKYELEFSH
FRLFDEHNDAAILILLEPIQEETIPKRFCKLRKIMNTKTYLEWPLDEGQQQIFWFNLKIA
LKY
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaactctggaaagggtgggtcatctacatggtcataacggcaaatctttct
gaagaaaaaaccatgatgcagatgtgtccttcatgtgatgccactcatttctgtgactgt
tcttcaatgaatttgagcaccattccttcagggctaacaactgatatcacggggctaaat
ctgtcctacaacagcataaaatatgtcagagaaactgatctgctggtgggggtgaatctg
agagtgctgctgctgcaattcaaccaaatttggacaatagataaggaatcatttatattc
cttggaaaattggaacatttggatttatcaaataataagttgactcacttgtcacccatt
tggtttagacatcttttttccctacagcacctaaacatacagggtaatttatatacaaca
ctgggggagaatcccttgttttctaatctcaaaaatttgagatatctgcacctggggaat
aacaattccttctctgctatacggaagcaagactttgatggaattacagttcttgagcaa
cttgagattgatggtcaaaggctcaggcaatatgaatcagggagtttgataacagttaac
ataaatcatatcatcataaacataaatgacgttcaagtgttatcagtgatggtagaagat
tttatacattctgtaatatgtttagaactgagacatatagccttcaatacagctaatgaa
tcttcattattggagccaatgagtcattctgtcatggagaaatttgtgttaaaaaatgtt
ttgtttacagatgcaagcattgacaaaatgttaaacatcttggtgcatgctgagcaattg
ttggagctggagctggacaattctatactgcagggaacgggacactggcatgaaccaatt
aaaataaagagaagaagccccatggaagtcgtgacaatacagagattaactatagaaaaa
ttttatttgttttcagatcttagcagtttaaaaaatcttgtaggtaacatcactaaaatc
acagttgtaaatactaaggtcttcttggtgccttgcaacatttcaaaacatttttcctca
ctcctttatcttgatctcagtgaaaatttgcttgcagatccaaatttggaacattcatcc
tgtgatggtgcatggcccttgctgcaaactttcaatttaagtcaaaatacattgggtgat
ttacaaatgacggcacgaagtctctctcatctaaaacaccttactcacctagatattagc
cgaaacaattttggtgagattccagaatcgtgtcagtggccagaaaacttgaaatattta
aatatctcaggcactcaaatacccaaattaacaacgtgcattcctcaaactcttgaagtt
ttggatgttagtagtaataacctcaatgattttagattaaagctaccacggctcaaagag
ctctatgtttcaaaaaacaaattaaagaccttgccagatgctccatttattcctaactta
gtagccctgagaatcagcagaaacaaattaaccagtttctcgaaagaagagtttggatca
tttaggaaaatggagacactggatgcaggtgacaataatttcatctgctcttgtgaattt
ctctccttcattcaatatcaggagggaatagctaatgtcttggctaactggccagagaat
tatatctgtgactctccgtcctctgtgagagggcagcaggtaaaatctgctcggctttcg
ctgtttgaatgtcacagaactttggccgtgtccttaatttgcattctggtggttttggta
atcctgcttattgtgatcctgggctacaaacttcatgtgatctggtacatgaaaatgacc
tgggcttggcttcaggcaaaaaggaaacccaagaaatcacacaatcatgacttctgctat
gatgcttttgtttcctacagtgaaagagactccgaatgggttgaaaacttaatggtacag
gaacttgagaacgctatccccccatttaaactgtgccttcataaacgggactttgtgcct
gggaagtggatcattgacaacatcattgactccattgaaaaaagtcataaaactctgttt
gtgctgtcagagcactttgtgcagagtgagtggtgcaagtatgagctggagttctcgcac
ttccgtctctttgatgagcataatgatgcagcaattttgatccttttggagcctattcag
gaggaaacaattcccaaaagattctgtaaactgaggaaaataatgaacacaaagacctac
cttgaatggcctcttgacgaaggtcagcaacagatattttggtttaatttgaaaatagca
ttaaaatactag
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integrated database retrieval system
