Trachemys scripta elegans (red-eared slider): 117878594
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Entry
117878594 CDS
T07347
Symbol
FGB
Name
(RefSeq) fibrinogen beta chain
KO
K03904
fibrinogen beta chain
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04517
IgSF CAM signaling
tst04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117878594 (FGB)
04518 Integrin signaling
117878594 (FGB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117878594 (FGB)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117878594 (FGB)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
117878594 (FGB)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117878594 (FGB)
Hyaluronan
Extracellular matrix or blood plasma proteins
117878594 (FGB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
Fib_alpha
Apolipoprotein
YwqH-like
DUF1664
Bacillus_HBL
Effector_1
NET2A
KxDL
mRNA_cap_C
HSP70
FapA
CENP-Q
FAM81B
DUF5798
DUF2570
KASH_CCD
SF-assemblin
DUF7605
Syntaxin
DUF8567
CCDC171
Motif
Other DBs
NCBI-GeneID:
117878594
NCBI-ProteinID:
XP_034628830
LinkDB
All DBs
Position
5:59215726..59227315
Genome browser
AA seq
494 aa
AA seq
DB search
MFKQASIMKLLLLCLLCVSIVKSLASLDYDDEESDNAPRANGEKVDARGHRPVDKRREPI
PTLRPAPPPISKGGYQARPTKPPTRGQKKEIVVYPDAGGCRHASDELGVLCPTGCELQTT
LVKQEQSVKSDIRDLKNKVEKQSETSSTFYEYMNTLENKLQRRQKQIKDNENVVSEYNTE
IEQHYTYIRENMDNNIPSSLRVLRSVVDTLHKKIQKLENAISSQMENCRSSCIVSCNIPV
VSGKECEDIIRKGGDSSEMYLIQPDAFFRPYKVYCDMTTANGGWTLIQNRQDGSVGFGRT
WDAYKKGFGNIAKSGGKKYCDTPGEYWLGNDKISQLTKMGPTEVLIEMEDWNGAKVSAHY
GGFTIQNEANKYQISVSNYKGTAGNALMDGASQLYGENRTMTVHNGMFFSTFDRDNDGWV
HADPRKQCSKEDGGGWWYNRCHSANPNGRYYWGGQYSWDMAKHGTDDGVVWMNWKGSWYS
LKKMSMKIRPFFPQ
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagcaagccagcatcatgaaactgctattgctgtgtctgctctgtgtttccata
gttaaatccctggcttctctagattatgatgatgaggaaagtgacaacgctcccagggct
aatggcgaaaaagtggatgctcgaggtcacagaccagtagataaaagacgggagccaatt
ccaactctcagaccagctcctcctcccattagtaaaggtggatatcaggctcgtccaaca
aaaccacccactcggggccagaagaaagaaattgtcgtttatcctgatgctggaggctgc
aggcatgcatcagatgagctaggagtgttgtgtccaactgggtgtgagctgcaaactaca
ttggtaaaacaggaacaaagtgtgaaatccgacattcgggacctaaagaacaaagtagag
aaacagtccgaaacctcttcaacattctatgagtacatgaatacactagaaaataaactg
caaagaagacaaaaacaaataaaagataatgaaaatgtagtttctgagtacaacacagag
atagagcagcactatacatacatcagagagaacatggacaacaacatcccatctagcctc
cgagtcctccgttcagttgtggataccttacacaaaaagatacaaaaactggaaaatgct
atatcatcccaaatggaaaattgccgctcttcatgcattgtttcctgtaatatcccagtg
gtatcaggcaaagaatgtgaagacattatcagaaaaggaggtgattcatctgaaatgtac
ctcattcagcctgatgctttcttcagaccttacaaggtttactgtgatatgaccacagca
aatggaggatggactttgattcagaaccgccaagatggcagtgttggctttgggagaaca
tgggatgcatacaaaaaaggatttggaaatattgcaaaaagtggagggaaaaaatactgt
gatactccaggtgaatattggcttggaaatgacaaaatcagccagcttaccaaaatggga
cccactgaagttttaattgaaatggaggactggaatggtgctaaggtttcagctcattat
ggaggattcaccatacaaaatgaggcaaacaagtatcagatatcagttagtaactataaa
ggcacagctggcaatgctcttatggatggagcttcacaactgtatggcgagaacagaaca
atgacagttcacaatggcatgttcttcagcacttttgacagagacaatgatggatgggtt
catgcagatccaagaaaacagtgttctaaagaagatggtggtggttggtggtacaatcga
tgccattcagccaatcccaatggcagatactattggggagggcagtacagctgggatatg
gcaaaacacggcacagatgatggagttgtatggatgaactggaaagggtcatggtattca
ttgaagaagatgagtatgaagattagaccattctttccacaataa
DBGET
integrated database retrieval system
