Trachemys scripta elegans (red-eared slider): 117878801
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Entry
117878801 CDS
T07347
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00280
Valine, leucine and isoleucine degradation
tst00650
Butanoate metabolism
tst00900
Terpenoid backbone biosynthesis
tst01100
Metabolic pathways
tst03320
PPAR signaling pathway
Module
tst_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117878801 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117878801 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117878801 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
117878801 (HMGCS1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
117878801 (HMGCS1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
Cullin
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
117878801
NCBI-ProteinID:
XP_034629187
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Position
6:complement(27036643..27055365)
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AA seq
531 aa
AA seq
DB search
MGFRNVSTTMPGSLPVNAEACWPKDVGIVALEIYFPSQYVDQTELETFDGVDAGKYTIGL
GQSKMGFCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQL
FEDSGNTDVEGIDTTNACYGGTAAIFNAVNWVESSSWDGRYALVVAGDIAVYATGNARPT
GGAGAVAMLIGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDR
CYFVYRNKIRAQWQKEGSDRDFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNSKT
ENGIYSGLEAFRDVKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVY
GCLASLLAQYSPQQLAGQRIGVFSYGSGFAATLYSVRVTQDATPGSSLDKITASLSDLKT
RLDSRKCIAPDVFAENMKIRQETHHLANYIPQCSVDDLFEGTWYLVRVDEKHRRTYARRP
VLGDGLLEAGTEVVHPSIVHELIPSPAKKVPRIPATTESEAVAVSVSNGEH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgggattccgtaacgtctctacaacaatgcctgggtctcttcctgtgaatgctgaagcc
tgttggccaaaagatgtgggaattgttgccctggagatctattttccttctcagtatgtt
gaccagacagaattggaaacatttgatggtgtggatgctgggaagtacaccattggcttg
ggtcaatcgaagatgggattctgctcagatagagaggatatcaactcactctgcttgact
gtggtacagaagcttatggagaggaacagtctctcctatgattgcattgggagattagaa
gttggaacagagacaatcattgacaagtcaaaatctgtaaagactgtcctgatgcagctc
tttgaggattctggtaatacagacgtagaagggattgacacaacaaatgcatgctatgga
ggcactgctgctatctttaatgctgttaactgggttgagtccagttcttgggatggtcgt
tatgcgcttgttgttgctggagacatagctgtatatgccactggaaatgccaggccaacc
ggtggagctggtgctgttgctatgttaattggtccaaatgctcctttaatttttgagcga
ggactgcgtgggacccatatgcagcatgcctatgacttttataagccagatatggtgtct
gaatatcctgtagttgatggtaaactatctattcagtgctacctcagtgcattagatcgc
tgctattttgtctaccgcaacaaaatccgtgctcagtggcaaaaagaaggaagtgacaga
gactttaccttgaatgactttggcttcatgatcttccattctccatactgtaaacttgta
cagaaatctgtggctcgactgttgttgaatgactttcttagtgaccagaactctaaaaca
gaaaatggtatctatagtggcttggaagctttcagggatgtaaaactggaggatacctat
tttgatagagatgtggagaaggcctttatgaaagctagtgctgaactctttaatcagaaa
accaaagcttctttacttgtatccaatcaaaatggaaacatgtacaccccttcagtctat
ggctgccttgcttctcttctagcacagtactccccacagcagctagcaggacaaagaatt
ggtgtgttctcctatggctctggttttgctgctacactctactctgttagagttacacag
gatgccacacctggttcttctctggataaaataactgctagcctatctgatctgaaaaca
agacttgactcaagaaagtgtattgcaccagatgtctttgctgaaaacatgaagattaga
caggaaacgcatcacttggccaactacattccacagtgttcagtggatgatctctttgag
ggaacatggtacctagtgcgagtggatgaaaaacacagaagaacttatgctcgacgtcca
gtgctgggtgatgggcttttggaagccggaactgaggttgtccatccaagcatagttcat
gagcttatcccgagtcctgctaagaaagtgccaagaatccctgcaaccacagaatctgaa
gctgttgctgtctctgtttccaatggagagcattaa
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