Trachemys scripta elegans (red-eared slider): 117879252
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Entry
117879252 CDS
T07347
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00310
Lysine degradation
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117879252 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117879252 (PRDM6)
03036 Chromosome and associated proteins [BR:
tst03036
]
117879252 (PRDM6)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
117879252 (PRDM6)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
117879252 (PRDM6)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117879252 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
117879252
NCBI-ProteinID:
XP_034630194
LinkDB
All DBs
Position
6:73544886..73635865
Genome browser
AA seq
567 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALTQLPPPERADPSADSLRQRPA
SLSSASSSSSSSTPSSSTSSCAAAAASLAGLTSISVAQIPVFGPLPSSESPSGAPASLQS
KDLCGGGAKCSERAAPRFRCTAEELDYYLYGQQRMEIIPLNQHTGDPNNRCDMCADNRNG
ECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRI
QQGTWIGPFQGVVLLPEKVQTGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRC
ARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVP
STVMEAMSRPDTLQPFNKSSKLPPATPQRSIVFPQTPCSRNFSLLDKSGPIESGFNQISV
KNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQ
SFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQ
ATQLSRHQRMPNECKPITESTESIEVD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcccggcgacccaggcggatctgcttttctgaaggtggatccagcttatctc
cagcactggcagcagctgttcccgcagagcagccagctcaagagcagcggggccctcacc
cagctcccgccgcccgagagagcggatccctcggctgacagcctccgccagcggccagcc
tctctctcctccgcgtcctcttcctcctcttcgtccaccccatcttcttccacctcctct
tgcgccgccgccgccgcttccctggccgggctgacctcgatctctgtggcccagattcct
gtctttgggccgctaccgagctccgagtccccctccggagccccggcctccctgcagagc
aaagacttgtgcggcgggggcgccaagtgcagcgagcgggctgcgcccaggtttcgatgt
acagcagaggagctggactattacctgtatggacagcaacgcatggagatcatccccctg
aaccagcacaccggtgaccccaacaaccgatgtgacatgtgtgctgataatcgcaacggt
gagtgccccatgcatgggccacttcactctctgcgccgcctagtgggcactagtagtgct
gcagccgcagcacctccacctgagatccctgaatggctcagggatcttccccgggaagtg
tgtctgtgtaccagcactgtgcctggtctggcctatggcatctgcgctgctcagaggatc
cagcagggcacatggattgggcctttccagggagttgtccttctgccggagaaggttcaa
acgggagccatcaggaacactcagcacctctgggaaatatatgaccaagatgggacacta
cagcactttattgatggcggggaacccagtaagtcaagttggatgaggtatatccgatgt
gcaaggcactgtggggaacagaacctaacagtagttcagtacaggtcaaatatattctac
agggcctgtatagatatccccagaggcaccgaactgctggtgtggtacaatgacagctac
acatctttctttggaatccctttacagtgtattgcacaggatgaaaacttgaatgtccct
tcaactgtaatggaggccatgtccagaccagacaccctacagccatttaacaaaagtagc
aaactaccccctgccacaccacagcgatccatagtatttccacagactccgtgtagcaga
aatttttctcttctggataagtctgggcctatcgagtcaggatttaaccagatcagtgtc
aaaaaccaacgagttcttgcaagcccaacgtcaaccagccaactaaattctgagttcagt
gactggcacctttggaaatgtgggcaatgctttaagactttcacccagcggatcctctta
cagatgcacgtgtgtacgcagaaccctgacagaccctatcagtgtggccactgctcccaa
tccttctcccaaccttcagagctaaggaaccacgtagtcacccattccagtgacagacct
ttcaagtgcggctattgcggccgtgcctttgctggtgctacaacactgaacaatcatatc
cggacgcatacgggggaaaaaccctttaagtgcgagaggtgtgagaggagcttcacacaa
gccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagagagc
acagaatcaattgaagtggattaa
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integrated database retrieval system
