Trachemys scripta elegans (red-eared slider): 117879813
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Entry
117879813 CDS
T07347
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123 isoform X1
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117879813 (RNF123)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117879813 (RNF123)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117879813 (RNF123)
Multi subunit type E3
KPC complex
117879813 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
117879813
NCBI-ProteinID:
XP_034631079
LinkDB
All DBs
Position
7:complement(52006532..52152160)
Genome browser
AA seq
1343 aa
AA seq
DB search
MTSRGAGTAFSRRNYRLSNESEKPKVTGIVNSKLLNDYLHRIFPSADGIQPAAAYRKPLT
FQNLQEHLDKLLAEDSGAEDSRDQILEGRLGPSTVVLDHISGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGVSLGTAFDNITRGAGMAYFPAISL
SFKESVAFNFGSRPLRYPVEGYRPLQDPPSMDLVEAHKLLGYLKNVIHIGIDMLEGKLVE
KDTSMWQLQGEPTVLITLAHIFNHFAPLMCKVYLVEDVLMNFLLSILEQGGAVEAHPLIQ
QLLDLMWLLMEDYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRK
YLLNNVLFDILRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEE
RLRRRAYDRGCQRLKKRIEVVEELQVQILKLLLNNKDRGGGEASRYIFLNKFRKFLQENA
SNRGNLTVLCPPEYMVCFLHRLISTLRCYWDGHKAKAPAALNSEEAYVPPQLFYNGKVDY
FDLQRLGGLLSHLKKTLKDDLALKANILIDPAELQAVTMDDLDEDEESATSTAQRPVAAL
AIGGALARPSWLSSPTLGRANRFLSTAAVSLMNPRRSLGTLEKMKARMLSVEQRTEDDRA
AGEPGCVRALVMAALVTAALVLVQAVWAGEVSPEAVEGSHGNEGLLLGRPPEEPEQSITE
NSLLEILDGIVMMYNLSVHQQLGKMVGVSDDVNEYALALKDTEEKISRCPKRRRDIYEEL
VKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDIYWLLRVCIRTIEHGDRTGSLFAFMPE
FYLSVAMNSYSALKNYFSPVHSMEELPGYEETLTRLAAILAKHFADSRIVGTDIRDSLMQ
ALASYVCYPHSLRAVERIPEEQRISMMRNLLAPYEQRPWAQTNWILVRLWRGCGFGYRYT
RLPHLLKTKPEDANLPSLQKPCPSTLLQRHMADLLCSDCDMAPSFLNSVLNQLNWAFSEF
IGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSVSLLRVLEMTVTLAPEIFLDWSRPSS
ELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLPGLESVDHYPILVAVTGILVRLLMDTD
FQGAKRATAVLLADPCFQLCSIQYLLGHAEPSALAATPPSADKRHFSLHTYTDYISQEEL
AKVERMLGHLSEESKQAAASMLPTSEEDLCPICYAHPISAIFRPCSHKSCKACINQHLMN
NKDCFFCKATITGVDDFTKPGSS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagaggtgctgggactgccttttcccggaggaactacaggctaagcaatgag
tctgagaagcccaaggtcacagggatagtgaacagcaagctgctgaatgactatctgcac
cgcatctttcccagtgctgatgggatccagcctgcagctgcttacaggaagccactgaca
ttccagaacctgcaggagcacctcgacaaattgctggcagaggacagtggtgcggaggac
agtcgagatcagatattagaggggcgacttggtccctctactgtggtgttggaccacatc
agtggttttgagggactcctcctggttgatgatgacctacttggggtgattggccacagc
aactttggctccatcagggccacaacctgcgtgtataaagggaaatggatctacgaggtg
ctcatctcctcccaagggctcatgcagattggctggtgcactctcaactgcaggtttaat
caggaggagggggttggggacactccggattcgtatgcatatgatggaaacagggtgcgc
aagtggaatgtcaccaccaccaactatggtaaatcctgggcggcaggagacatcgtcagc
tgtctgatagacctggatgaggggaccattgctttctgcctgaatggtgtgtctctggga
acagctttcgataacatcaccaggggagctggcatggcgtatttccccgctatcagcctc
tcctttaaagaatcagtcgcttttaacttcggcagccgcccactccgttatccggtggag
ggatatcgccccctgcaggacccgcccagcatggacctggtggaagctcacaagctgttg
ggctatctgaagaatgttattcacattgggatagacatgttggaggggaagttggtggag
aaggacacgtcgatgtggcagctgcaaggagagcccacagtgctgatcaccctggcacac
atctttaaccactttgcccctctcatgtgcaaagtgtacctggtggaagatgtgctcatg
aacttcctgctgagcattctggagcagggaggcgctgtggaagcacatcctctcatccag
cagctactggatctcatgtggcttctcatggaggattacgaggtgcatgaatgcctcaag
cagctgctgatgtccctgctccgggcttacaggttctctcccatcatcccagacctgggt
ttacagatccattacctccggctcaccattgcagtcctgaagcacgagaagtccaggaaa
tatctgctcaacaatgtcctcttcgacatactccgctcagtggtgttcttctacatcaag
agccccctgcgtgtggaggaggctggcctgcaggagctcatccccaccacctggtggcca
aaccgcttcaccaaagagggcaaggaaagcaaggaggtgaaggaggagagtgctgaggag
aggctgcgccggcgggcatatgacagaggctgccagcggctcaaaaaacgcattgaagtg
gtggaagaactccaggttcagatcctgaagctgcttctgaacaacaaagaccgaggaggg
ggggaagcctccagatacatcttcttgaacaaattccgcaagttccttcaggaaaatgct
agcaaccgagggaacctgactgtactgtgcccgccagaatacatggtctgcttcctgcat
cgactcatctccaccttgcgctgctactgggacgggcacaaggccaaggctcctgcagcc
ctgaacagtgaggaggcatatgttcctcctcagctcttctataatgggaaggtggattac
tttgacctgcagcgacttggtggactcctgtctcatctcaagaagactctgaaagatgac
ctggctttgaaagcaaatatcctgattgatcctgcggagctgcaggctgtgaccatggac
gacctggatgaggatgaggagtctgcaacgtccacagcccagcgcccagttgcagcactg
gccattggtggtgcccttgccaggcccagttggctcagctcacccaccctgggccgtgcc
aaccgcttcctcagtacagctgccgtcagcctgatgaacccgcggcggtccctgggaacc
ctggagaagatgaaagcacgcatgctgagtgtggagcagcggacagaggatgacagagct
gcaggagagccggggtgcgtccgtgcgctggtcatggcagcgctggtcacggcagcgctg
gtcctggtgcaggcagtctgggctggtgaagtctctcctgaagcagtagaaggcagccat
ggaaatgagggtctgttactggggagaccccccgaggagccggagcagtcaatcactgag
aactcccttctggagatcctggatggaatagtgatgatgtacaacctcagcgtccaccag
cagcttggtaagatggtgggtgtgtccgatgatgtaaacgaatatgccctggcactgaag
gacacagaggagaagattagccgatgtccaaagaggaggagggacatctatgaggagctg
gtgaaaagccagaaggttttctcagagaaacttaaccacctgagtcgccggctagcctgg
atcaacgtcaccatctactccaaggagaagatgcaggacatatactggttgctgcgagtg
tgcatccgcaccattgagcacggggacaggacgggctcgctcttcgccttcatgccggag
ttctacctcagtgtggccatgaacagctacagcgcgctgaagaactacttcagccctgtc
catagcatggaggagctacccggctatgaagagactctgacgcgtcttgctgccatcctg
gccaagcactttgctgactccaggatcgtcggcactgacatccgggactctctgatgcag
gcgctggccagctacgtctgctacccacactcgctgcgggccgtggagaggatcccagag
gaacagcgaatatccatgatgaggaacctgctggctccctacgagcagcggccatgggcg
cagaccaactggatccttgttcggctgtggcggggctgtgggtttggatacaggtacacg
cggctcccgcacctgctgaaaaccaagcccgaggatgccaatctccccagcctgcagaag
ccgtgcccctccacccttctgcagcggcatatggccgatctgctgtgcagtgactgcgac
atggcacccagcttcctcaacagcgtcctcaaccagctcaactgggccttctcggagttc
attggcatgatccaggagatccagcaggcagcagagcgcctggagaggaactttgtggac
agccgtcagctgaaggtgtgcgcgacgtgcttcgacttgtccgtgagcctgctcagggtg
ctggaaatgaccgtcacactggcccccgagattttcctcgactggagccgcccctcctcg
gagctgctgctcaggagacttgcccagctgttgaaccaggtgctgaatcgggtgacagcc
gagcggaacctgttcgacagagtggtcaacctccggctgccagggctagagagcgtggat
cattatccaatccttgtggctgtgacggggattctggtccgactcctcatggacactgac
ttccaaggggccaagcgtgcgacagctgtgctcctggcagacccctgcttccagctctgc
tccatccagtacctgctgggccatgcagagccatcagcactggcagccacgcctccctct
gcagacaagagacatttctccctgcacacctacaccgactacatcagccaggaggagctg
gccaaagtggagcggatgctgggccacctgagtgaagagtccaagcaggcagctgcctcc
atgctgcctaccagtgaggaggacctgtgccctatttgctacgcacacccgatctcagcc
atcttcaggccatgctcccacaagtcctgcaaagcctgcatcaaccagcacctgatgaac
aacaaggactgcttcttctgcaaggccaccatcacaggcgtggatgacttcaccaagcca
ggcagctcctag
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integrated database retrieval system
