KEGG   Trachemys scripta elegans (red-eared slider): 117879892
Entry
117879892         CDS       T07347                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tst03037]
    117879892 (IFT122)
Cilium and associated proteins [BR:tst03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   117879892 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 WDR55 TPR_IF140-IFT172 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 TPR_GEMI5 Beta-prop_Vps41 TPR_IFT80_172 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st B-prop_COPA_B_2nd WD40_MABP1-WDR62_1st PEP5_VPS11_N eIF2A TPR_7 Beta-prop_IFT140_2nd TPR_COPA_B Beta-prop_WDR75_1st TPR_12 TTC7_N Beta-prop_SPT8
Other DBs
NCBI-GeneID: 117879892
NCBI-ProteinID: XP_034631294
LinkDB
Position
7:18544970..18599200
AA seq 1184 aa
MRAALTWRDKAEQCIYDLAFKPDGTQLIIAAGNRLLVYDTSDGTLIQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKSSSKITCCSWTNDGQYLALGMFNGIVSIRNKNGEEKVKIEHPGSSLSPVW
SICWNPSRDEHNDILAVADWGQRLSFFQLSGKQIGKGRVLNFDPCCVSYFSKGEYILMGG
SDKQASLYTKDGVRLGTIGDQSSWVWTCKVKPDSNYVAIGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYKNRLAIQLPEKILIYELYSDDS
SDMHYRVKEKIAKKFECNLLVVCSDHIILCQEKRLQCLSFNGVKEREWLMESLIRYIKVI
GGPSGREGLLVGLKNGQILKIFVDNLFAIVLLKQSTAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGYLNIKASNFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLERKMFKEAYQIACLGVTDTDWKELAMEALEGLEF
ETAKKAFTRVRDLRYLELISSIEERKKRGESNNELFLADVYAYQGKFHEAAKLYRRSGHE
SLALDMYTDLRMFDYAKDFLGSGDPKDTKMLITKQADWAKNINEPKAAVEMYISAGEHMK
AIEISGDHGWVDMLIDIARKLDKAEREPLSKCAYYFKRLDNHGYAAETYMKIGDLKALVH
LHVETQRWEEAFSLSEKHPEFKDDVYVPYAQWLAENDRFEEAQKAFHKAGRQSEAVKVLE
QLTHNAVVESRFNDAAYYYWMLSMQCLDIAQENEQQKTEMLQKFHHFQHLAELYHVYHSI
HRYTEEPFSFHLPETLFNISRFLLHSLTKETPLGISKVNTLFALAKQSKALGAYKLARHA
YDKLQGLKIPARFQKSIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCR
QPFVFSASSYEVLHLVEFYLEEGITDEEAVALIDLEAPRLNKREDKWQEMASDGAQTLRF
DDNTDIIEEDDPFTAKLSFEQGGSEFVPVIVNRAVLRSMSRRDVLIKRWPKPLQWQYFRS
LLPDASITMCPTCFQMFHSEDYELLVLQHNCCPYCRRRIDESNQ
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgagggccgcactgacctggagggataaggccgagcaatgtatatatgatcttgctttt
aaacctgatggaactcagctgataattgcagcaggaaacagattgctggtgtatgataca
tctgatggaaccttaattcagcccttgaaagggcacaaggacacagtgtactgtgtggct
tatgctaaagatggcaagcgttttgcatctggctctgctgacaaaagtgtaatcatttgg
acttcaaagttagaaggcattctgaaatacacgcataatgattctatacagtgtgtttca
tacaatcctgttactcaccaactggcatcctgctcctccagtgattttggcttgtggtct
cctgagcagaagtcagtctccaaacataaatcaagcagtaaaatcacctgctgtagctgg
acaaatgatggccaataccttgctttggggatgttcaatggcattgtcagcataaggaat
aaaaatggtgaagagaaagtcaaaatagaacatcctggcagctctttatctccagtatgg
tcaatttgctggaatccatcaagagatgaacacaatgacatcttagctgtagcagactgg
ggtcaaaggctttccttttttcagctcagtggcaaacagattgggaagggcagggtgctg
aattttgatccctgctgtgttagctatttttccaaaggagaatatatattaatgggaggc
tcagataagcaagcctctctctacacgaaggatggagtgcgtctcggtaccataggggat
cagagtagctgggtgtggacatgtaaagttaaaccagactccaattatgtggcgatagga
tgccaggatggaacaatttccttttatcagctgattttcagtacagtccatggactctat
aaagatcgttacgcttacagggacagcatgactgatgttattgtccagcacctaattact
gagcaaaaagttagaataaaatgcagagagcttgtaaagaaaattgcaatctacaaaaac
agattagcaatccagctgccagagaaaatcctgatttatgaattatattcagatgactcc
tcagacatgcattaccgtgtgaaggaaaagatagcaaagaaatttgaatgcaacttgctg
gttgtatgttcagatcacatcatcttatgccaggagaaaagactacagtgcctctcattt
aatggtgttaaagagcgggagtggctgatggagtctctcattcgttacattaaagtaatt
ggaggcccttcaggaagagaaggcctcttagtaggtctgaagaatggccagattctgaag
atatttgtggacaatctttttgcaattgtcctgttgaagcaatccacagctgtgcgctgt
ctggatatgagtgcatcccgaaacaagttggcagtagtagatgaaaatgacacctgccta
gtatatgatattcataccaaagagctgctgttccaggaacccaatgctaatagcgtggct
tggaatacacagtgtgaggatatgctttgcttttccggagggggttacctcaacatcaaa
gctagtaactttcctgtccatcagcaaaaacttcaaggctttgttgtgggatacaatggc
tccaagattttctgtcttcatgttttttctatgtcagctgttgaagttcctcagtctgct
cctatgtatcaatacctggaacggaaaatgttcaaagaagcctatcagattgcttgttta
ggagtaactgacactgactggaaagagctggctatggaggccttagaaggtctagagttt
gaaactgctaaaaaggcatttaccagagtacgagatcttcggtatctagaactgatcagc
agcattgaggagaggaagaagcgtggagagagtaacaatgagctatttctagcagatgtt
tatgcctaccagggaaaattccatgaggcagctaaactgtacagaaggagtggacatgag
agcctcgctcttgatatgtacactgatttacgcatgtttgattatgcaaaggatttcctt
gggtctggagatcccaaagacactaagatgctcatcacaaaacaagcagactgggccaag
aatatcaatgaaccaaaagcagcagtggagatgtacatttctgcaggcgagcacatgaag
gccatagaaatcagtggagaccatggctgggttgatatgttaattgatatagctcggaag
cttgataaagctgagcgtgaacctttgtcaaaatgtgcctactattttaaaagacttgac
aaccatggttatgcagcagaaacctacatgaagataggtgacctaaaggccctggtacat
ctccatgtggaaactcagcgttgggaagaagccttttctttgagtgaaaagcatcctgaa
tttaaagatgatgtctatgtcccttatgctcagtggctggcagagaatgatagatttgaa
gaggcccaaaaagcattccacaaggctggcagacagagtgaggccgtaaaagtgctggaa
cagctaactcacaatgctgtggtagaaagccgatttaatgatgcagcgtattattactgg
atgctctccatgcagtgtttagatatagcccaagagaacgaacagcagaagactgaaatg
ttacagaagtttcaccacttccagcacttggcagaactttatcacgtctatcactctatt
cacagatacactgaagagccgttcagtttccatttgcctgaaacactcttcaatatttcc
aggtttttacttcacagcctaaccaaggagactccgttgggtatctctaaagtcaataca
ttatttgcactagcaaagcagagcaaagctctgggtgcatataaattggcccgtcatgcc
tatgacaagttgcagggactgaagatcccagctagatttcaaaaatcaattgagctgggc
agcctgacaatccgatccaagccattccatgacagtgaagagcttgtgcccttgtgttat
aggtgctccaccaacaaccccttgctaaataatctggggaatgtgtgcattaactgcaga
cagcccttcgtcttctctgcttcatcttacgaagtattgcatctggtggagttctatttg
gaagaagggatcactgatgaagaagccgtagctcttattgatctggaagcaccaagatta
aataagagagaggataaatggcaagagatggcaagcgatggagcacagacgctgagattt
gatgacaacacagacattattgaagaggatgatccctttacagcaaaattgagctttgag
caaggaggctcagaatttgttcctgtgatagtgaatcgtgcagttctccggtcaatgagc
cggagggatgtcctgattaaacgctggccaaagccattacaatggcagtacttccggtcc
ttgctaccagatgcttccattaccatgtgtccaacatgctttcagatgtttcattcggag
gattatgagctcctggtgctccagcataactgttgtccgtactgtcggagaagaattgac
gagtcaaaccagtga

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