Trachemys scripta elegans (red-eared slider): 117879974
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Entry
117879974 CDS
T07347
Symbol
NUP210
Name
(RefSeq) nuclear pore membrane glycoprotein 210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117879974 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117879974 (NUP210)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117879974 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_9th
Ig_NUP210_6th
NUP210_Ig
Big_2
AlphaC_N
Motif
Other DBs
NCBI-GeneID:
117879974
NCBI-ProteinID:
XP_034631465
LinkDB
All DBs
Position
7:35645869..35766119
Genome browser
AA seq
1880 aa
AA seq
DB search
MAWALLLLLLLLPPPFSVASKLNIPKVLLPFTRSTRINFTLEASEGCYRWSSTRPEVASI
EPADQDERQCSQKAVVQARSSQPTRLTSIIFAEDILTGQVLRCDAIVDIIHGIQIVSTTR
ELYLEDSPLKLKIQALDSEGNTFSTLAGLAFDWTIVKDTEADGFSDSHNALRILKFLEST
YIPPSYISEMEKVAKQGDTVLVSGMKTGSSKLKARIQESVYKNVHPAEVRLLILENILLN
PAYDIYLLVGTSLQYKVQKIRQGKITELMMPSDHYELQLQNNILGPEGDPARPVAKLDQA
TSTVTALQQGQINLVLGHKSIRMQGASRLPNSTIYVVDPGYLGFTIHPGDRWVLETGRLY
EITIDAYDKSSNKVYLSDNIRINTELSEEYFEILKSSLNGSYHYVKAIKKGQTIIDAALT
SVVDQDGGVHTLPVPVRNQQEVEVYVPIILSPSILTFPWQPKAGAYQYTIKAHGGSGNFS
WSYSNQAVATVTVKGVMTTGSDIGVSVIQANDVQNPLHYGEMKVYVTEPSGMEFTPCQVE
ARVGQILELPLRINGLVNIETSEMVTLSDCSHFDLVVEVENRGVFKPLQGRLMPSSDFCS
GVRVKAEAQGYTTLVVSYTHGHVHLSASITIAAYLPLKTIDPSSVALVTLGSSKDMLFEG
GPRPWVQEPSKFFRNITAEDTESIGLSLFGPPTSRNHFQHWVRVSCKTLGEQVIALTVGN
KPTVTNPFPAIEPAVVKFICAAPSRLTLTPIYANPQLDLSCPLLQQNKQVVPVSNYRNPV
LDLAAFDQQGRKFDNFSSLGINWESTKVSLANVEPSMPMELSLKVDGSGQKKMHGLQTVL
VHHESGTTAVSATATGYQQSHLSAAKVNIPYEPLIPVSATIELILVEDVKVSPSDVTVYN
HPDVKAELLIKEGSGYFFINTSIINVVKVAYQEARGIALVYPLFPGTLTLMIHDLCLTFP
APAKAEIYVSDIQELYVRVVDKVEIGKTVKAYVRVLDDSRKPFLAKYFTVMDLKLRAASQ
IVSLVPLDEALDDHTAAFLVHGTVIGQTSLTATVADKNGQEINSAPQQIEVFPPFRLLPR
KVTLIIGAVIQITSEGGPQPQSNIIFSISDERIASVNSTGLVRGEAIGNGTVTGVVQAVD
AETGQIVVVSQDKVEVEVVRLVAVRIRAPITRMKTGTQMPVYVMGITSNQTPFSFGNALP
GLTFHWSVTKRDILDVKTRHNEASLQLPAKYNFAMDVYGRAKGRTGLKVIVKALDPTAEQ
FHSLAGELSDEIQIQVFDKLLLVTPQVDAEQILMSPNSFIKLQTNRDRVASLSYRVLDGP
NKVPVVQIDERGFLNSGSLIGSSTIEIISQELFGVNQTIVVAVKVSPVSYLRISISPVLH
TQNKEALLALPLGVTLTFTVHFHDNSGDTFHSHNSVLNLATNRDDFVQIGKGTTNNTFVI
RTVNVGLTLLMVWDTEHSGIADYVPLPVQHAIFPELRDMVVGDVICFSTTLINQEGLSGV
WSSSLSSVLQVDPRTGVAVARDSGVVTVYYEIPGLLKTYREVLISIPQRTIAMHVSGVKT
NLQGVAASKVIVATGDRSKNLKGDCSPVQIEAIKELQPESNIGCHLRFNKDAFDFPAHDI
FTAEPGFDAVSGHYTCSITMHRLTDKQLKHLSISKTALLVTASVQGSHFSGEQISAEVPF
NPGFYADQTEILLSNHYTSSDVKIFGATEILDKLEVKCGSPMVKAFEKEKSYGLPSYVIY
TVSVSDPGVPSQGSLSTILTISSPVTDQSITVPVTVIYVAERSEPMRHGASLFQHFLDSY
QVMFFTLFALLAGTAVVIIAYHAVFSPKEQNTYPAFTPRTTPQHSYNSFSVSSATSLSPS
YSDRKNSPPSRLWSTGYASH
NT seq
5643 nt
NT seq
+upstream
nt +downstream
nt
atggcctgggcgctgttgctgctgctgctcctgttgccgccgcccttctccgtggcctcc
aagctgaacatccccaaagtgctgctgcccttcacccggagcaccaggatcaacttcacc
ctggaagccagcgagggctgctaccgctggtcttccacaaggccagaagttgccagcata
gaacctgcagatcaagatgaacgccaatgttcacaaaaggctgttgtccaggcacgttca
tcgcagccaacacgtctgacaagtatcatttttgctgaagatatattgactggtcaagtg
cttcgttgtgatgctatagttgacataattcatggcatccaaattgtgtccacgacaaga
gaactttatcttgaagattcaccgctgaagctgaaaattcaggctttggattctgaagga
aacacttttagcacattggcggggttagcctttgactggacgatagtaaaagatactgag
gctgatggcttctcagattcgcacaatgcattgcgtatactcaaattcttagaatctacc
tatataccgccttcctatatatcagagatggaaaaagttgccaaacaaggagacaccgtt
ctggtgtctggaatgaaaacagggagttccaaattaaaagcaagaatacaggaatctgtt
tataagaatgtacatcctgcagaagtcaggttgcttattttggaaaacattcttctaaat
ccagcttatgatatctacctgctggtaggaacatcacttcaatataaagttcagaaaata
agacaaggcaagattacagaattaatgatgccttcagatcactatgaactgcagcttcag
aacaacatccttggtcctgagggagatccagctcggcctgttgccaagttggatcaggca
acatcaacggtaactgcattgcagcagggacaaattaacctagtgctggggcacaaaagt
attcgcatgcaaggtgcttccagattaccaaacagcactatctatgttgtggatcctgga
tatttaggatttacaattcatcctggtgacagatgggtcttagaaacaggcagactttat
gaaattacaatagacgcatatgacaaatcaagcaataaggtgtatttatctgataatatc
agaattaatacagaattgtctgaagaatattttgagattttgaaatcctctctgaatgga
tcatatcactatgtgaaagcaataaagaagggtcaaactattatcgatgctgctttaaca
tctgtagtagatcaggatggaggtgttcatacattgcctgtaccagtacgaaaccagcaa
gaagttgaagtttatgttcccattatcctttcaccgagcattttgacatttccatggcag
ccaaaggcaggagcctatcagtacacaataaaggctcacggtggaagtggaaatttcagt
tggtcctattctaaccaggctgttgctacagtaacagtcaaaggagtcatgacaactgga
agtgatattggtgtcagtgttatacaggcaaatgatgttcagaacccactgcactatgga
gaaatgaaggtatatgtaactgaacctagtggcatggagttcacgccgtgtcaagttgaa
gcacgtgtgggtcagatactggagctgcccttgaggattaatggcctagtgaatattgaa
accagtgagatggtcacactgagcgattgttcacatttcgacttagtcgtggaggtagaa
aaccgcggcgtcttcaaaccactccaagggagacttatgccaagttctgatttttgcagt
ggagtcagagtgaaagctgaggctcaaggatacacaacacttgttgttagttacactcat
ggtcatgtccaccttagtgctagcatcaccattgctgcctacctaccactaaaaactata
gatccttcttctgttgccttggtaactttgggttcttccaaagacatgttgtttgaaggt
ggaccaagaccatgggtacaagaaccttcaaaattctttaggaacatcactgctgaagat
acagaaagtattggtttatctttatttgggcctccgacatctcggaatcatttccagcac
tgggttagagtatcttgcaagaccctgggagaacaagtgattgccttaaccgttggaaat
aagcccacagttaccaacccttttccagccatcgaacctgccgttgtgaaatttatctgc
gcagccccttcccgactcactttgactcctatttatgcaaatcctcaacttgacctctcc
tgccctttgctgcaacaaaacaagcaagtggttcctgtttcaaactatcgcaatccagta
ttggacttggctgcttttgaccagcaggggcgtaaatttgataatttcagttctcttggt
attaactgggaatcaacaaaagtttccttagccaacgttgagcccagtatgccgatggag
ctgtctctaaaagtggatggaagtggtcagaagaaaatgcatggcttgcaaactgttcta
gttcatcatgagtctggaacaactgctgtctccgctactgcgacaggataccagcagtct
catctcagtgcagctaaagtgaatataccgtatgaacctcttatccctgtgtctgccacc
attgagctgatacttgtagaagatgtgaaagtgagtcctagtgatgttacagtctacaat
catcctgatgtcaaggcagagctcctcatcaaagagggttctgggtattttttcatcaac
accagtattataaatgttgtaaaagtggcttatcaggaagctcgaggcattgctttggtg
tatcctttatttccaggaaccttaacactaatgattcatgacttgtgtctgactttccct
gctccagctaaagctgaaatctatgtatctgatatacaagaactgtatgtccgagttgtt
gacaaggtggagattgggaaaaccgttaaagcttatgttagagtattggatgactcgagg
aaaccttttctggctaaatatttcactgtcatggatttaaaactgagggcagcatcacag
attgtgtcgctggttcctctcgatgaagctcttgatgaccatactgctgcttttctagtt
cacggcacggtcataggtcaaaccagccttacagcaacagtcgctgataaaaatggacaa
gaaatcaattctgctccccaacagattgaagtctttcctccatttaggctattgccgaga
aaagttaccctgatcataggagcagtgattcagattacttcagaaggaggccctcaacct
cagtccaacataattttctccatcagtgatgagaggatcgcatcagtgaacagcactggc
cttgtaagaggagaggcaattggaaatgggacagtaactggagtggttcaagctgtggat
gcagagaccgggcaaattgtggtggtgtctcaggataaagtggaagtcgaagtcgtacgg
cttgtggctgttagaatccgtgcacccatcacacgaatgaaaaccggtacacagatgcca
gtttatgtgatgggcatcaccagtaatcagacccctttctcatttggcaatgcattgcca
gggttaacgtttcactggtctgtcaccaagagagatatcctggacgtcaagacaagacac
aatgaggcttctcttcagcttccagcaaaatataattttgctatggatgtttatggcaga
gcaaagggaagaacagggctgaaggtcattgtgaaagcccttgatcctactgctgaacag
tttcacagcctggcaggagagctgtcagatgaaatccaaattcaggtatttgataaactt
cttctagttactccacaagtagatgcggagcagatcttaatgtcacctaactcatttatt
aaacttcaaacaaacagggacagagtagcttccctgagttaccgtgtcctggatggtccc
aataaagttcccgttgtacagattgatgagagaggctttctgaactcaggatccttgata
ggatcatcaacaattgaaataatttcccaggagctgtttggagtcaaccagaccattgta
gttgccgttaaggtgtctcctgtttcctacctgagaatctctattagtcctgttctgcac
actcaaaacaaagaggctctgttggctctaccattgggtgtgacattaaccttcacagtc
catttccatgataactctggagataccttccattcgcacaattctgtgctcaaccttgca
accaacagagatgactttgtgcagattgggaaaggaaccacgaacaatacatttgtaatt
cgaactgtaaatgtaggcttgaccttgcttatggtttgggatacagagcacagtggaatt
gcagattatgtccctcttcctgtgcaacatgccatttttcctgagctcagagacatggta
gtaggtgatgtcatctgttttagtactacactgataaatcaagaaggcttgtcaggagtt
tggagctcttcactgagcagtgttcttcaggttgacccaaggacaggtgtagctgtggca
agggattcaggagttgtcactgtttattatgagattcctggactacttaaaacttacagg
gaggtattgatcagtattcctcaaaggactatagcaatgcatgtatctggagtgaaaaca
aacttacaaggagttgcagcttcaaaagttatagttgcaactggggacagaagcaaaaat
ttgaaaggggactgttcacctgttcagattgaagccattaaagaactacaaccagagtcc
aatatcggctgccaccttcgttttaataaggatgcatttgatttcccagcacatgatatt
tttacagcagaacctggatttgatgcagtttcaggacattatacctgttccatcacaatg
cacagacttactgacaagcagctaaagcatctgagcataagcaaaactgctctcctagtc
acagcttcagtccagggcagccatttctctggagagcagatcagcgctgaagtgccgttc
aatccagggttttatgctgatcagactgaaattctcttaagtaaccattatacgagttct
gacgtgaaaatatttggagccactgaaatacttgacaaactggaggtgaaatgtgggtca
ccaatggtgaaggcctttgagaaggagaaatcatatggactgcctagttatgtaatctac
actgttagtgtatctgatccaggagttccaagccaggggtccttatcaaccattcttacc
atatctagcccagtgactgaccagtcaatcactgttccggtgacagtgatttatgtagct
gagagaagcgagccaatgagacacggagccagcttattccaacacttccttgattcctat
caagtaatgttcttcacgctttttgcattgctggcagggacagctgttgtgatcatagcc
taccatgcagttttctccccaaaagaacagaacacttatccagcatttaccccaaggaca
acgcctcaacacagctataacagtttttctgtttcatctgcaacttctctcagtccttcg
tactcagatagaaaaaacagtcctccctccaggctatggagtactggttatgcttcacat
taa
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