KEGG   Trachemys scripta elegans (red-eared slider): 117880076
Entry
117880076         CDS       T07347                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03420  Nucleotide excision repair
tst04110  Cell cycle
tst04114  Oocyte meiosis
tst04120  Ubiquitin mediated proteolysis
tst04141  Protein processing in endoplasmic reticulum
tst04310  Wnt signaling pathway
tst04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117880076 (RBX1)
   04120 Ubiquitin mediated proteolysis
    117880076 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117880076 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    117880076 (RBX1)
   04350 TGF-beta signaling pathway
    117880076 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    117880076 (RBX1)
   04114 Oocyte meiosis
    117880076 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tst04121]
    117880076 (RBX1)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117880076 (RBX1)
Enzymes [BR:tst01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     117880076 (RBX1)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   117880076 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     117880076 (RBX1)
   Cul2 complex
     117880076 (RBX1)
   Cul3 complex
     117880076 (RBX1)
   Cul4 complex
     117880076 (RBX1)
   Cul7 complex
     117880076 (RBX1)
   Cul8 complex
     117880076 (RBX1)
   Cul9 complex
     117880076 (RBX1)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      117880076 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      117880076 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 117880076
NCBI-ProteinID: XP_034631681
LinkDB
Position
1:complement(89456111..89470203)
AA seq 108 aa
MAAAMDVDTPSGANSSASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgtggacaccccgagcggcgccaacagcagcgccagcaagaaa
cgcttcgaagtgaagaagtggaatgcagtagctctctgggcctgggacattgtggttgat
aactgtgccatttgcaggaaccatatcatggatctgtgtatagaatgtcaagctaaccag
gcatcggctacctctgaagagtgtactgttgcatggggtgtctgcaatcatgctttccac
ttccactgcatctctcgttggcttaagactcgccaggtgtgtccgctggacaacagagaa
tgggagttccaaaagtatgggcactaa

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