Trachemys scripta elegans (red-eared slider): 117880425
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Entry
117880425 CDS
T07347
Symbol
RELA
Name
(RefSeq) LOW QUALITY PROTEIN: transcription factor p65
KO
K04735
transcription factor p65
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04137
Mitophagy - animal
tst04210
Apoptosis
tst04218
Cellular senescence
tst04620
Toll-like receptor signaling pathway
tst04621
NOD-like receptor signaling pathway
tst04622
RIG-I-like receptor signaling pathway
tst04623
Cytosolic DNA-sensing pathway
tst04625
C-type lectin receptor signaling pathway
tst04920
Adipocytokine signaling pathway
tst05132
Salmonella infection
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117880425 (RELA)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117880425 (RELA)
09143 Cell growth and death
04210 Apoptosis
117880425 (RELA)
04218 Cellular senescence
117880425 (RELA)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117880425 (RELA)
04621 NOD-like receptor signaling pathway
117880425 (RELA)
04622 RIG-I-like receptor signaling pathway
117880425 (RELA)
04623 Cytosolic DNA-sensing pathway
117880425 (RELA)
04625 C-type lectin receptor signaling pathway
117880425 (RELA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117880425 (RELA)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117880425 (RELA)
09171 Infectious disease: bacterial
05132 Salmonella infection
117880425 (RELA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117880425 (RELA)
Transcription factors [BR:
tst03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
117880425 (RELA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
117880425
NCBI-ProteinID:
XP_034632488
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All DBs
Position
7:complement(29701433..29722049)
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AA seq
556 aa
AA seq
DB search
MDDLLPLVLLHQDWGLQEPTPSSPPYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDT
TKTHPTIKINNYTGPGKVRISLVTKDAPHRPHPHELVGKDCKDGYYEAELSPERNIHSFQ
NLGIQCVKKRELDEAVAQRIRTNNNPFNVPLDNQKGDYDLNAVRLCFQVWVQDPVGTGHL
VQLPLVVSQPIYDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVRFFKDS
WEAKGSFSQADVHRQVAIVFKTPPYQDQALREPVTVQMQLRRPSDKEVSEAMEFRYLPDE
GDFHRIEEKRKRTRDTFKNFVQKAPFTAVVVPESRSPRRIAVPVRTAVPKPSGLTGMAST
MGQLPPLQKPQATAQHPSLPFTGPSRAPPPPAPQMGFSTVNLEEFSSLGISSRAQPPPPA
PEAEPNFDPFFHLPFEGGGDPTAMELGALLEDTTYTSLESINTTEFRQLLNQGSSTEGAD
GHSMLLTYPESITRLMSSQRGVVGVTGEEPQGNGGGGGGSSTNSFLNGVLGNLPEESLTS
MGDLDFSALLSQFSSS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggatgacctgctgccacttgtcctcctccatcaggactggggcctccaggagcccacc
cccagcagccccccctacgtggagatcatcgaacagcccaagcagcgcggcatgcgcttc
cgctacaagtgcgaggggcgctcggccggcagcatccctggggagcgcagcaccgacact
accaagacccaccccaccatcaagatcaataattacacaggccccgggaaggttcgtatc
tctctggtgaccaaggatgccccccaccgaccccacccccacgagctggtgggcaaagat
tgcaaggatggctactatgaggctgagctatcacctgagcgcaacatccacagcttccag
aatctgggcatccagtgtgtgaagaaacgggagctggacgaggctgtggcacagcgcatc
cgcaccaacaacaaccccttcaatgtgcccttggacaaccagaagggggactatgacctg
aatgccgtgcggctctgcttccaggtgtgggtgcaggaccctgtgggcactgggcacctc
gtccagctgcccctcgtggtgtcacagccgatctacgacaaccgagcccccaacacggct
gagctgaagatctgccgggtcaatcgcaactcggggagctgcctggggggggacgagatc
ttcctgctctgtgacaaggtgcagaaggaggacattgaggtccggttcttcaaggactcg
tgggaggccaagggctccttctcgcaggcagatgtgcaccggcaggtcgccatcgtgttc
aaaacccccccataccaggaccaggcactcagggagccggtgacggtgcagatgcagctc
cggcgcccatctgacaaggaggtcagcgaggccatggagttccgctacctgccagatgaa
ggtgacttccatcgcatcgaggagaagcgcaagcgaacgcgggacaccttcaagaacttt
gtgcagaaagcgcctttcacagcagtggtggtaccggagtcacgttccccgcgtcggatt
gctgtccctgtccgcacagccgtgcccaaacccagtggtctcactggaatggcaagcacc
atggggcagctgccacccctccagaagccacaggccacggcccagcacccctccttaccc
ttcactgggcccagccgagctcctcctcctcccgccccccagatgggcttcagtacagtc
aatctggaggagttctccagcctgggcatctcaagccgggcccagcccccaccccctgct
cccgaggccgagcccaactttgaccccttcttccacctgccgtttgagggcgggggcgac
ccaaccgccatggagctgggggccttgctggaggacaccacctacaccagcctggagtcc
atcaacactactgagttccggcagttgctgaaccaggggtcatccaccgagggtgctgac
gggcacagcatgctcctgacctatcccgagtcgatcacccgcctgatgagcagccaacgt
ggtgtggtgggcgtgacaggggaggagcctcagggcaacggtgggggtggggggggcagc
agtaccaacagcttcctcaatggggtcctgggcaacctcccggaagagagcctcacctcc
atgggggatctggacttcagcgctctgctcagccagttcagctcctcctag
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