Trachemys scripta elegans (red-eared slider): 117882092
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Entry
117882092 CDS
T07347
Symbol
PTPRC
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117882092 (PTPRC)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117882092 (PTPRC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117882092 (PTPRC)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117882092 (PTPRC)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117882092 (PTPRC)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117882092 (PTPRC)
CD molecules [BR:
tst04090
]
Proteins
117882092 (PTPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Y_phosphatase3
PTP_N
RVT_1
DSPc
PTPlike_phytase
fn3
Stress-antifung
SCIMP
Motif
Other DBs
NCBI-GeneID:
117882092
NCBI-ProteinID:
XP_034635966
LinkDB
All DBs
Position
8:65367560..65485741
Genome browser
AA seq
1385 aa
AA seq
DB search
MTMFLWLELLAFGFALLDNNVFVKGEETVAETKNSPLPTSTSSPSARSTPHSPAGNSKGQ
VQIPTETGIIPTSSTNPSTHEDSNSSFGSSNQPHSSTAALTSLTPATTTYKPSGVSNQSR
LHTTSPSVNHTATSTQAIISQTSSNTTLTTPTLTTVPTKVTTPISCEKIDFKVTYNYSNV
SSVTAKLNISGEKREYNISYNSTYIGKNEDQSIAGLMECQTYNITVECKECCSISHVIHI
PPEPEKPKGLQNGSITSTSISFSWEAPEKIPEGSTHGYRVTCPLYGSVCPHHNGGIGESS
GTNHGRPAGGYPDTGDGNVGIYQFPIRNHPVVSEPSSPRLSSPLREACTAVQEDLHPVVK
NPEQVRVSPDLTPAQKKEIFEMIIQNQDVFLTKPGCTTETYHHIITNPGARVTVRPYQVS
AAKREEIKVEVKKMLEMGTIKESHSQWPSPIALVPKPDGTTRLCNDFCRLNEIVQFDAYP
TPRIDKLVDRLGNAPYLTTLDLTKGYWQIPLAEDGKCVNELTFNCLELQPSKLYNVSVEA
YIKSKYSSNTFYGDAETKTWRTDASKPKKVTNIEKKWISNNAVLITCEAQSVNWEKKIFT
LVWEGKTETKEGTCEFQKEDLYYLKQYNFEIYLDNGKYKGEAIKGEVTTKYNSQALIIFL
AFLIIVTSIALLIVLYKIYDLHKEKLSNSGEDVVLVKRDDEKQLMNVEPIPAEMLLETYK
RKIADEGRLFLDEFQSIPRVFSKFSIKEARKNYNQNKNRYIDILPYDYNRVELSEMNGDP
GSDYINASHIDGFKEPRKYIAAQGPKDETTDDFWRMIWEHKATIIVMVTRCEENNRNKCA
QYWPTTENSTETFGDIVVKSNESKMCPDYIIQKLHITNRKEKTPGRDVTHIQFTSWPDHG
VPEDPHLLLKLRRRVNALSNFFSGPVVIHCSAGVGRTGTYIAIDAMLEGLEVEGRVDVYG
YVVKLRRQRCLMVQVEAQYILIHQALVEYNQFGETEVTLSELHTYLNNLKKRDPPSDPSL
LEAEFQRLPSYRGWRTQNTGNRQENKSKNRNSKMIPYDFNRVPIKHEEEKSKESEHDSEE
SSDEDSDCEEASRYINASFITGYWGPKEMIATQGPLPETINDFWQMIFQRKVKVIVMLTE
LKEGDQQLCAQYWGEGKQTYEGIEVEMKDVNLSSSYTIRAFDVTHVKRKETRNVYLYQYH
KWNGLDLPENPKDLVNMILNLKQKLAAKSVTEDSRCSRSIPIVIHCRDGSEQTGVFCALL
TLLESAETEDVIDVFQVVKSLRRARPGMVPTFEQYQFLYDTISSIYPAQNGQVKKNGKQE
DTVEINIEVDKTDQEADLITIDITSLESEANMNMEAREDSKSADGTQGTEGSSNGPKTPV
LTESA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtttttgtggcttgaactcttggcatttggctttgcccttctggacaacaat
gtttttgtcaaaggagaagaaacagtagcagaaactaaaaattctcccttgcccacaagc
acatcatctccatctgcacgctccactccacactcacctgcaggcaacagtaaagggcaa
gtgcagatacctactgaaactggcatcattccaacaagcagcacaaaccccagcactcat
gaagactcaaactcttcctttggatccagcaatcagccacacagcagcactgctgccctt
acttcactcactcctgctaccaccacatataaaccatcaggtgtttccaatcagtcacgc
ttgcacaccacctcaccatccgtgaaccatactgcaaccagcactcaagcaatcatttct
cagacttcctcaaacaccactttgactactcccactctcacaacagtacctactaaagtg
acaactccaatatcttgtgaaaaaattgattttaaagtgacatataactacagtaatgta
agctcagtcactgcaaagttgaacatttctggagaaaagagagaatacaatatttcctac
aactccacttatatagggaaaaatgaagaccaaagtattgcaggacttatggaatgtcag
acatataacattacagttgaatgtaaagaatgctgcagcatatcacatgtaattcatatc
ccacctgaaccagagaaacctaagggacttcaaaatggaagcattacttccacaagtata
tcatttagctgggaagcacccgaaaaaataccagaaggttctacccatggctatcgcgtt
acgtgtccgctttacgggtcagtgtgccctcaccacaatggaggaattggtgaaagctct
ggtacaaaccacggcagaccagcaggaggctacccggatacaggggatggcaatgtagga
atctaccagtttccaataagaaaccacccagttgttagtgaaccaagcagcccaagattg
agctctcctctgagagaggcatgcacagctgttcaagaagacctgcacccagtggtcaaa
aaccctgaacaggtgagggtgtctcctgatttaacaccagcccagaagaaggagatattt
gagatgatcatccagaaccaagatgtattcttgacaaagccaggttgcacaactgagaca
tatcaccacatcatcacgaaccctggagccagagtaacagtgaggccataccaggtatca
gcagccaaaagggaggaaataaaagtggaagtgaaaaaaatgctggagatggggaccatc
aaagagtcccacagtcagtggcccagtccgatagcgctggtgcccaaacctgatggcacc
acaaggttatgcaacgacttctgtcgactaaacgagatagtccagttcgatgcatacccc
acaccccgcatagacaaactagtggaccgtctgggtaatgccccatacttgacgacccta
gacttgacaaaggggtactggcagattcccctagccgaagacggcaaatgtgtcaatgag
ctcacttttaactgccttgagttacagccttccaaactatataatgtgtcagtagaggca
tacataaaaagcaaatattcatcaaacacattttatggggatgctgaaactaaaacatgg
cgcacagatgcatcaaaaccaaaaaaagtgacaaatatagaaaaaaaatggatatccaat
aatgctgtcctcattacatgtgaggcgcaatctgtaaattgggagaaaaaaatattcaca
ctggtatgggaggggaagactgaaactaaggaaggcacatgtgagtttcaaaaagaagat
ctttattatctgaagcaatacaactttgagatttatctggacaatggaaaatataaaggg
gaggctatcaaaggcgaagtaacgacaaaatacaattctcaagccctgattatattcctg
gcgttcttgattattgtgacatcaattgccttacttattgttctgtataaaatctatgat
ctccacaaagagaaattaagcaattcaggtgaagatgtggtgcttgttaagagagatgat
gaaaaacaactgatgaatgtagagccaattcctgcagaaatgttgttggaaacctacaag
agaaagattgctgatgaaggaagacttttccttgatgaatttcagagcattcccagagtt
ttctctaagttttcaataaaggaagcacgcaaaaactacaaccaaaacaaaaaccgttac
attgatattctcccttatgattataaccgagttgaactctcagagatgaacggagaccca
ggatcagactatataaatgcaagccatattgatggtttcaaagaaccaaggaagtatatt
gctgcacaaggccccaaggatgagaccactgatgatttctggagaatgatctgggaacac
aaggcaacaattattgttatggtgactcgctgtgaagaaaataataggaacaaatgtgcc
caatactggccgacaacggagaatagcactgaaacttttggggacattgttgtgaagagc
aatgaaagtaaaatgtgtcctgactacattattcagaaactccatattacaaatagaaag
gagaagacacctgggagagatgtgactcacattcagttcactagctggccagatcatgga
gtgcctgaagatcctcatcttctcctcaaattacgccgcagagttaatgccctaagcaac
ttttttagtggcccagtagtgattcattgcagtgctggtgttggacgaactggaacctat
attgcgatcgacgctatgctggaggggctagaggtagaaggcagagtggatgtttatggc
tatgttgtaaagctccgtcgacagcgttgcctcatggttcaagtagaggcacagtacatc
ctgatccatcaagcactggtggaatacaatcagtttggtgaaacagaggtcacgctctct
gaactgcacacctatcttaataatctgaagaaaagagatcctcccagtgacccctctctg
ctggaagcagaatttcagaggctaccatcctacaggggatggcggacacagaacactggc
aatcgacaggaaaataaaagtaaaaaccggaattccaaaatgattccatatgactttaac
agagtaccaattaaacatgaagaggagaaaagcaaagagagtgaacatgattcagaggaa
tcatctgatgaggacagtgattgtgaggaagcaagcagatacataaatgcatcattcata
actggctactggggtccaaaagaaatgattgcaacacaagggccactaccagaaacgatc
aatgacttctggcaaatgatctttcagagaaaagtcaaagtaattgttatgctgacagag
ctgaaagaaggagatcagcaactctgtgcacaatattggggagaaggaaaacaaacatat
gaaggcatagaagttgaaatgaaagatgtcaacctgtcttctagttacaccatacgcgca
tttgatgtaacacatgtgaagaggaaagaaactcgaaatgtgtatttgtaccagtaccac
aagtggaatggcttggaccttcctgaaaaccccaaagacttagtcaacatgattctgaac
ctcaaacaaaaacttgcagctaaaagtgtcactgaggacagcagatgcagccggagcatt
ccaattgtcattcactgccgtgatggatctgaacaaactggtgtgttttgcgccttgttg
actctcttggaaagtgcagaaacagaagatgtgattgatgtcttccaagtagtgaaatct
cttcgacgtgccagaccaggaatggtccccacttttgaacaataccagttcctgtatgat
actattagcagcatctaccctgcacagaatggacaagtaaagaaaaacggcaagcaggaa
gatacagttgaaattaacattgaagtagataaaacagatcaggaagctgatttgattact
atcgatatcacctcactggagtcagaggccaatatgaatatggaagcgcgtgaagattcc
aaatctgcagatggcactcagggaacagaaggctcttcaaatggacccaagactccagtt
ttaactgagagtgcatag
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integrated database retrieval system