Trachemys scripta elegans (red-eared slider): 117882841
Help
Entry
117882841 CDS
T07347
Symbol
XIAP
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04210
Apoptosis
tst04217
Necroptosis
tst04510
Focal adhesion
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117882841 (XIAP)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117882841 (XIAP)
04217 Necroptosis
117882841 (XIAP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117882841 (XIAP)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117882841 (XIAP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117882841 (XIAP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117882841 (XIAP)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117882841 (XIAP)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117882841 (XIAP)
Peptidases and inhibitors [BR:
tst01002
]
Peptidase inhibitors
Family I32: IAP family
117882841 (XIAP)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117882841 (XIAP)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117882841 (XIAP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
117882841
NCBI-ProteinID:
XP_034637570
LinkDB
All DBs
Position
9:14620730..14667409
Genome browser
AA seq
497 aa
AA seq
DB search
MTCNSPDNSEACATPDCDHDQEMAEEYSRLRTFANFPNCCPISASTLARAGFFYTGEGDK
VKCFSCHATIEGWEHGDSAVGRHRKISPKCKFIARFNFLKKDMHPVLQNCQCRVENCSGN
STLHCSSDRSSDLSPDYLLRTGQVVDMSDSMYPRNPAMCSEEARLKSFHNWPAYAPLTPK
ELASAGLYYSGVDDQVECFCCGGKLKNWEPFDRAWSEHKRHFPRCFFVLGHDVGNVGNVP
NESNFAEVCRSGLNNADHPKNPSMAEYEARIKTFVTWRYPVVKERLAEAGFYSIGNGDHV
LCFHCGGGLQEWQQNEDPWEQHAKWFPGCKYLLQEKGQEFVNSVQLTPLSRDSTIESSEK
TSLLIDDDLLQNQLVQDAIRMGFSLSEIKNIMEKKLQTYGENYTSVEVLVSDIIHAQKEN
VQEEVSSESSLPKDLSTEEKLKRLQEEKMCKICMDKDISVVFIPCGHLVACKECAEAVDK
CPVCCMVITKRQKIFMY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgtaacagtccagataactctgaagcttgtgccactccagattgtgaccatgac
caagagatggctgaagagtactccagactgaggacttttgccaactttccaaattgttgt
cctatttcagcatcaacactagcacgagctggcttcttttatacaggagagggagacaaa
gtgaagtgcttcagctgtcatgcaactattgaagggtgggagcatggagactcagcagtt
ggaagacatagaaaaatttccccaaaatgcaaatttattgctcgatttaattttttaaaa
aaagatatgcatcctgttctccaaaactgtcaatgcagagttgaaaattgttccggaaat
tcaacactccactgctcttctgacagatcatctgatctcagtccagattaccttttgaga
actgggcaggttgtggacatgtcagatagtatgtaccccaggaaccctgctatgtgcagt
gaagaagctaggttaaaatcttttcacaactggccagcctatgctccattaacaccgaag
gagttagccagtgctgggctgtattactcaggtgttgatgatcaagtggagtgcttttgt
tgtggtggaaaactgaaaaactgggaaccttttgatcgagcttggtcagaacataagagg
cattttcctaggtgcttttttgtcctgggccatgatgttggaaatgttggaaatgtccca
aatgaatctaattttgctgaggtttgcaggagtggcttaaacaatgcagatcacccaaaa
aatccatctatggcagaatatgaagcacgcatcaagacatttgtgacgtggagataccca
gttgttaaagagcgacttgctgaagctgggttctatagtataggtaatggtgatcatgtt
ttgtgctttcactgcggtggaggactgcaagagtggcagcagaatgaagacccttgggag
caacatgctaaatggtttccaggatgcaaatatctgctacaagagaagggacaagaattt
gtaaacagtgttcagttaacgcctttatcgagggattccacaatagaatcttctgagaag
acatcgctacttatagatgatgatctcctacaaaaccagttggtacaggatgccatccgt
atgggtttcagtttgtctgagattaagaacattatggagaagaaactgcagacatatgga
gaaaactatacatctgttgaggttctagtttcagatataatacatgctcaaaaagaaaac
gtacaggaagaagtatccagtgagagctcactaccgaaagatctgagtactgaagagaag
ttaaaacgtttacaggaggaaaagatgtgtaaaatctgtatggataaagacatctcagtt
gtttttattccctgtggccatctggttgcttgtaaagaatgtgctgaagcagttgataaa
tgccctgtgtgttgcatggttattacaaaaagacagaaaatatttatgtattag
DBGET
integrated database retrieval system
