Trachemys scripta elegans (red-eared slider): 117883197
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Entry
117883197 CDS
T07347
Symbol
TRPM2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117883197 (TRPM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117883197 (TRPM2)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
117883197 (TRPM2)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117883197 (TRPM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Csx1_HEPN
NUDIX
Sde182_NH-like
Motif
Other DBs
NCBI-GeneID:
117883197
NCBI-ProteinID:
XP_034638179
LinkDB
All DBs
Position
9:52868697..52925656
Genome browser
AA seq
1497 aa
AA seq
DB search
MLPPELNGVCPDQGDSYIVHSKICDLEMVPNLRRSNSGFCKSKRKAHFATGNNEKENLSS
WIPENIKKKECVYFVESSQMSDTGRAMCECGYPREQHLEEATKSSVFLGKEWDPKRHIQE
MPTDAFGDISFAGLGPKVGKYVRVSVDTPPCVIYQLMTQHWGLDVPNLLISVTGGAKNFN
MMPRLKNVFRRGLVKVAQTTGAWIITGGSHAGVMKQVGEAVRDFSMSSSCKEGEIVTIGI
ATWGTVYNRGSLICPMGSFPAEYVLDEESQGNLSCLDSNHSHFILVDDGTHGRYGVEISL
RTRLEKFISEQTKVKEGVAIKIPIVCVVLEGGPGTLNTIYNAITNGTPCVIVEGSGRVAD
VIAQVANRPVPEITISLIQKKLSILFQDTYELFTEGKIVEWTKKIQDIVRSRQLLTIFRE
GKDGQQDVDVAILQALLKASRNRDHFGHENWDHQLKLAVAWNRVDIARSEIFTDDHEWKP
ADLHPVMAAALIANKPDFVKLFLEQGVRLKEFVTWDTLIYLYENMAPSSLFHGKLQKVLV
EEKERSAFSKVPGIQLHHVSQVLRELLGDSTQPLYPKPKHAERHRLSIAVPHIKLNVQGV
SLRSLYKRSAGRVTFTMDPVRDLLIWAIVQSRKELAEIIWAQSQDCIAGALACSKILKEL
SKEEDDTDSMEEMLTLAEEYEHRAIGVFTECYRKDEERAQKLLIRVSEAWGKTTCLQLAL
EAKNMNFVSHGGIQAFLTKVWWGKLCVDNGLWRVILCVVFFPLIYTSFVTFREKRLQPMS
CLTRTRAFFTAPVVIFHLNILSYFSFLWLFAYILMIDFQPTPSWREYVIYFWLFSLVCEE
TRQLFYDPDGFGLLKMASLYFSDFWNKLDVCAILIFIAGLTCRWIPSTLYPGRIILSLAF
IIFCLRLMHIFTVSKTLGPKIIIVKRMMKDVFFFLFLLAVWVVSFGVAKQAILIHNEERV
DWIFRGVVYHSYLTIFGQIPSYIDGVNFNLDQCSPNGTDPYKPKCPESNKDKRPVFPEWL
TVILLCLYLLFTNILLLNLLIAMFNYTFQQVQEHTDQIWKFQRHDLIEEYHGRPAAPPPF
ILFNHLQLFVKRVLLRQPAKRHKQLKEKLEKNEEAALLSWEMYLKENYLQHQQCREKQNM
EQKIRDVAQRVDVLVELLDLDRVKRTGLVEQRLTGLEEQMSQTAKTLAWIVRALRGNGFG
SEEDVPTMVPSKAPELKEYGSEEKPEETTALYHVSARNLLYPSSSTVRFPVPDEKVPWEV
EFQIYDPPFYTADRKEVAASDLLRDSLEALSKINYNAMDGLINRQSFHGTYAVQNRLPLN
PMGRTGLRGRGSLRFFGPNRALHPIVTRWRRNMDGSIYRKSLKKMLEVLVVKSPVSDHWA
LPGGSLEPGESLPLKLKRVLRREFWPQFQNLLNQGAEVYKGYIDDPRNTDNAWIETVAIN
MHFEDQSDMQMKRLNSFLQGSDPEPCVWWQLVDKRIPLYANHKELLQKVTALLGAYY
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgctaccgccagagctgaatggagtctgccctgatcagggagacagctacattgtgcat
tccaagatctgcgacctcgaaatggttcccaacctcagacgcagcaatagtggcttctgt
aagagcaagaggaaggctcactttgccactggcaataatgaaaaggagaatctcagctcg
tggattcctgaaaacatcaagaagaaggagtgtgtgtactttgttgaaagttcccaaatg
tcagatactgggagggccatgtgtgagtgtggttaccccagggaacagcacctggaagag
gctacaaagtcatctgttttcctggggaaagaatgggaccccaagaggcacatccaagaa
atgccaacggacgcgtttggtgatatcagctttgcaggtctgggaccaaaggtgggaaag
tatgtgcgcgtctcggtggacacccctccatgcgttatctaccagctgatgactcagcat
tggggcctcgacgtgcccaacctgctcatctctgtgactgggggagctaagaacttcaac
atgatgccaaggttgaagaacgtcttccgacgggggctggtcaaggtggcccagacaaca
ggtgcctggatcataacaggtgggtcccacgccggtgtgatgaagcaggtgggagaagct
gtgagagacttcagcatgagcagcagctgcaaagagggcgaaattgtcaccatcggcata
gccacctgggggaccgtgtacaaccgtggcagcctcatctgccccatgggcagcttcccg
gctgagtacgtgctggatgaggagagccaggggaacctgtcctgcctggatagcaaccac
tcccacttcatcctggtggatgacgggacccatggcagatacggtgtggagatctccctg
aggaccagactggagaagttcatttccgagcagactaaggtgaaagaaggagtcgccatc
aagatcccgatcgtctgtgtagtgttggagggaggacccgggacactcaatacaatctac
aatgctatcaccaatggcaccccatgcgtgatagtggaggggtccgggcgtgtggccgat
gtcattgcgcaggtggccaatcggcctgttccagagataaccatctccttgatccagaag
aaactgagcatcctcttccaggacacctatgagctcttcaccgagggcaagatcgtggag
tggaccaaaaagatccaagacatagtgcggagcaggcagctcctgaccattttccgggag
ggcaaagatggccagcaagatgtggacgtggccattcttcaggcactgctcaaagcctcc
cgaaaccgcgaccactttggccacgagaactgggaccaccagctgaagctggcagtggcc
tggaacagggtggacattgctcgcagcgaaatcttcacagatgaccatgaatggaagcct
gcagatctgcaccccgtgatggccgccgccctgatcgccaacaagccggacttcgtgaag
ctgttcctggagcagggcgtgcgcctgaaggagttcgtcacctgggacaccctgatctac
ctctacgagaacatggcgccctccagcctcttccacggcaagctgcagaaggtgctggtg
gaggagaaggagcgctcggccttctccaaggtgccggggatccaactgcaccacgtgtcc
caggtgctgagggagctactgggcgactccacgcagccgctgtacccgaagcccaagcac
gccgagaggcaccggctctccatcgccgtcccgcacatcaagctcaacgtgcagggagtg
agtctccgctccctctacaagcgctcagccggccgggtcaccttcaccatggacccagtc
agggacctcctcatttgggctattgtccagagtcgcaaggagctggcagaaatcatctgg
gcccagagccaggactgcattgcgggggctctggcctgcagcaagatcctgaaggagctg
tccaaggaggaggacgacacggacagcatggaggaaatgctgaccctggcagaggagtat
gagcaccgagccatcggcgtgttcacagagtgttaccgcaaggacgaggagagagcccag
aagctcctcatccgcgtctcggaggcctggggcaaaaccacctgcttacagctggcgctg
gaggccaagaacatgaattttgtgtcccacggaggcatccaggcctttctgacaaaagtc
tggtgggggaagctgtgcgtggacaatgggctctggagggtgatcctgtgcgtggtgttc
ttccccctcatctacaccagcttcgtcaccttcagggagaagaggctgcagcccatgagc
tgcctgacacgcacccgggccttcttcacggcccccgtcgtcatcttccacctgaacatc
ctctcctacttcagcttcctctggctcttcgcctacatcctgatgatcgacttccagccg
acgccgtcctggcgggagtatgtcatctatttttggctcttctccctggtgtgcgaggag
acccgccagctgttctatgaccccgatggctttgggttactgaaaatggcttccttgtac
ttcagtgatttctggaacaaactggatgtttgtgccatcttgatctttatagcagggctg
acctgccgatggatcccatcgactttatatccaggacggatcatattgtctctggctttt
attattttctgcttgaggctgatgcacattttcacagtcagtaaaactctggggcccaag
atcatcatagtgaagagaatgatgaaggacgtcttcttcttcctcttcctcttggctgtc
tgggttgtgtccttcggcgtagccaagcaagctatcctgatccataacgaggagcgtgtg
gactggatcttccggggcgtcgtctaccattcctacctgacgatttttgggcagatccct
tcctacatcgacggggtaaacttcaatctggatcagtgcagcccgaatggaacagacccc
tacaagcccaagtgccctgagagcaataaggacaagcggcccgtcttccccgaatggctg
acagtcatcttgctctgcctgtatctgctcttcacaaacatcctcctcctcaacctactc
atcgccatgttcaactacacgtttcagcaggtgcaggagcacaccgaccagatctggaag
ttccagcggcacgacctgatagaggagtatcacggccggcctgctgctcccccgcccttc
atcctcttcaaccacttgcagctctttgtcaagagggtcctgctccggcagccggcgaag
cggcacaaacagctcaaagaaaagctggagaagaacgaggaagcggcccttctctcctgg
gagatgtacctgaaggagaactacctgcagcaccagcagtgccgggagaagcagaacatg
gagcaaaagatccgagacgtcgcgcagagggtggacgtattggtggaattgctggatttg
gatcgggtgaagaggaccggtctggtggagcagaggctgactggtctggaagagcagatg
tcccagactgccaagactctggcctggattgtgcgggccctgcgtgggaatggatttggt
tcagaggaggacgtgcccaccatggtccccagcaaagccccggagctgaaggagtacggc
tcggaggagaagccagaggagacgacggctctgtaccatgtgagcgcccgcaacctcctc
tatcccagctcctccacagtccgtttcccggtgccggatgagaaggtgccctgggaggtg
gagttccagatctatgaccctcccttctacacagcagacaggaaggaggtggctgcgagt
gatcttctcagagactccctggaggctctttcgaagataaactacaatgcgatggacgga
ctgatcaaccgacagagcttccatggcacgtatgccgtccagaacaggctgccgctgaat
cctatgggcaggacggggttacgaggccgaggaagcctacgcttctttggaccgaaccgt
gcgctgcaccccatagtgacgcgctggagaaggaatatggatggatccatttatagaaag
agcctaaagaaaatgctggaggtcttagttgtcaagtctcctgtgtcagatcactgggct
ctgccagggggatcactggagccaggggaatcgctgccactgaagctgaagcgggtcctg
aggagggagttctggccacagttccagaacctgctgaaccaaggtgcagaggtatacaaa
ggctacatcgatgaccccaggaacacggacaatgcttggatcgagacagtggccatcaac
atgcactttgaagatcagagcgacatgcagatgaagcggctgaattcgtttctccagggc
agcgacccagagccatgtgtctggtggcagctggtggacaagagaattccgctgtacgca
aaccacaaggaacttctgcagaaggtgactgctcttttgggagcctattactga
DBGET
integrated database retrieval system
