Trachemys scripta elegans (red-eared slider): 117883353
Help
Entry
117883353 CDS
T07347
Symbol
CD40LG
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04514
Cell adhesion molecules
tst04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117883353 (CD40LG)
04514 Cell adhesion molecules
117883353 (CD40LG)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117883353 (CD40LG)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117883353 (CD40LG)
04090 CD molecules [BR:
tst04090
]
117883353 (CD40LG)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Tumor necrosis fators
117883353 (CD40LG)
CD molecules [BR:
tst04090
]
Proteins
117883353 (CD40LG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Motif
Other DBs
NCBI-GeneID:
117883353
NCBI-ProteinID:
XP_034638491
LinkDB
All DBs
Position
9:5207833..5224671
Genome browser
AA seq
258 aa
AA seq
DB search
MNEPYSPTTPRPSSTSSPNTMKIFMCFLIVFIIAQTIGTVLFCLYLHMKLDKLEQELSLQ
EDYLFLRRIQKCRKPEGAGSSLLDCKEIINRFQDLLVKDPEVSKDDAKFEMQKDDRQQPI
SAHLMGFKNSTKKVSVLQWQKTGYAPMSNLISYKGGKLKVEKEGLYYIYSQVSFCTKTAP
GAPFTVFIYLNLPSESDRLLLKGQDTHSSSSVYCALQSTHLGGVFELRKGDVVFVNVTDS
TQVNYDHGNTYFGMFKLY
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccttatagtccaacgacgcctcgacctagcagtaccagctcacctaacacc
atgaaaatttttatgtgttttcttattgtatttattatagcacagactattgggactgta
cttttttgcttatatcttcacatgaagctggataagttggaacaggagttgagcttacag
gaagattatttgttcctccgaagaatacaaaaatgtcggaaaccagaaggtgcgggctca
tcattattggactgtaaggagatcataaaccgattccaggatctgctagtcaaagatcca
gaagtcagcaaggatgatgcaaaatttgaaatgcaaaaagatgacaggcagcaaccaatt
tcagctcacctaatggggttcaagaacagcaccaagaaagtatcagttttacaatggcag
aaaacggggtatgcccctatgagcaacctgatatcctacaaaggagggaaattgaaggtg
gaaaaagaagggctctactacatctactcccaggtcagcttctgcaccaagacagctcct
ggggcgccatttacggtgtttatttatttgaacctaccatcggaatctgatcggctctta
ttaaagggacaggatacgcacagctcatccagtgtttactgtgccctacaatccactcac
ctgggaggagtgtttgaactccggaaaggtgatgtggtgtttgttaatgtgacagattcg
actcaagtgaactatgatcatggaaacacatactttggtatgtttaaactctattga
DBGET
integrated database retrieval system
