Trachemys scripta elegans (red-eared slider): 117883612
Help
Entry
117883612 CDS
T07347
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
tst04510
Focal adhesion
tst04540
Gap junction
tst04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117883612 (PDGFA)
04020 Calcium signaling pathway
117883612 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117883612 (PDGFA)
04540 Gap junction
117883612 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117883612 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117883612 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117883612 (PDGFA)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117883612 (PDGFA)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117883612 (PDGFA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
117883612
NCBI-ProteinID:
XP_034638965
LinkDB
All DBs
Position
10:13242840..13271602
Genome browser
AA seq
211 aa
AA seq
DB search
MRTWACILLIGFCYLPFAFPEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSHSVHSAKHVQENHPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
SSNSNSDYREEETGRPRQTGKKRKRKRLKPT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcattttgctgataggtttttgctaccttcccttcgcgtttccc
gaggaagctgaaatcccccaggagctaatcgagagactggctcacagcgaaatccacagc
atccgcgatttgcagcgcctcctggagattgattccgtaggatatgacgatgtttcagaa
acaaacttgagatctcatagtgttcattctgctaaacatgtccaagaaaatcaccctgta
cccattcgcagaaaaagaagcatcgaggaagccattcctgccgtctgcaaaacaagaact
gttatatatgagatacctcggagtcagatcgatcccacgtctgctaatttcctgatatgg
ccaccgtgcgtggaggtgaaacgttgtactggctgttgcaacaccagcagcgtgaaatgc
cagccgtcacggatacatcacagaagtgtcaaggtggcaaaagtggaatatgttagaaaa
aagccaaaattaaaagaagttctggtgaggttagaagagcatatggaatgcacctgtaca
tcatcaaattctaattcagattatcgagaagaagaaactggaaggcctaggcaaacaggt
aaaaaacggaaacgaaaaaggttaaaaccaacataa
DBGET
integrated database retrieval system
