Trachemys scripta elegans (red-eared slider): 117883612
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Entry
117883612 CDS
T07347
Symbol
PDGFA
Name
(RefSeq) platelet-derived growth factor subunit A isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
tst04510
Focal adhesion
tst04518
Integrin signaling
tst04540
Gap junction
tst04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117883612 (PDGFA)
04020 Calcium signaling pathway
117883612 (PDGFA)
09133 Signaling molecules and interaction
04518 Integrin signaling
117883612 (PDGFA)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117883612 (PDGFA)
04540 Gap junction
117883612 (PDGFA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
117883612 (PDGFA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117883612 (PDGFA)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117883612 (PDGFA)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117883612 (PDGFA)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Growth factors/receptors
117883612 (PDGFA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
117883612
NCBI-ProteinID:
XP_034638965
LinkDB
All DBs
Position
10:13242840..13271602
Genome browser
AA seq
211 aa
AA seq
DB search
MRTWACILLIGFCYLPFAFPEEAEIPQELIERLAHSEIHSIRDLQRLLEIDSVGYDDVSE
TNLRSHSVHSAKHVQENHPVPIRRKRSIEEAIPAVCKTRTVIYEIPRSQIDPTSANFLIW
PPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVRLEEHMECTCT
SSNSNSDYREEETGRPRQTGKKRKRKRLKPT
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctgggcttgcattttgctgataggtttttgctaccttcccttcgcgtttccc
gaggaagctgaaatcccccaggagctaatcgagagactggctcacagcgaaatccacagc
atccgcgatttgcagcgcctcctggagattgattccgtaggatatgacgatgtttcagaa
acaaacttgagatctcatagtgttcattctgctaaacatgtccaagaaaatcaccctgta
cccattcgcagaaaaagaagcatcgaggaagccattcctgccgtctgcaaaacaagaact
gttatatatgagatacctcggagtcagatcgatcccacgtctgctaatttcctgatatgg
ccaccgtgcgtggaggtgaaacgttgtactggctgttgcaacaccagcagcgtgaaatgc
cagccgtcacggatacatcacagaagtgtcaaggtggcaaaagtggaatatgttagaaaa
aagccaaaattaaaagaagttctggtgaggttagaagagcatatggaatgcacctgtaca
tcatcaaattctaattcagattatcgagaagaagaaactggaaggcctaggcaaacaggt
aaaaaacggaaacgaaaaaggttaaaaccaacataa
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