Trachemys scripta elegans (red-eared slider): 117883765
Help
Entry
117883765 CDS
T07347
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04144
Endocytosis
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117883765
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117883765
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117883765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117883765
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117883765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PML_CC
ANCHR-like_BBOX
zf-C3HC4_3
zf-RING_5
PML_C
zf-B_box
zf-RING_UBOX
zf-C3HC4
Prok-RING_4
Lebercilin
MukF_C
Motif
Other DBs
NCBI-GeneID:
117883765
NCBI-ProteinID:
XP_034639380
LinkDB
All DBs
Position
10:complement(39834355..39865488)
Genome browser
AA seq
751 aa
AA seq
DB search
MQVMEEEFQFLLCQGCRKEPTNPKLLSCLHTLCTDCLEENKPVGQCPICQAPIPQVSGIP
DQDNLLFANLQAKLSTYQKIVSSSDLVCDLCNDLAEFWCSECEEFFCIRCFEAHQWFSKK
KSHETRKVRELKAESAKQFLEGARKSRILFCSNPTHNDQNYITSSIYCRGCLKPLCCSCA
LLDSEHSKLYCNIQTEIERRQEELGSLSEELKRKKAHFEDVYKSLKGKADHIDQVRTENQ
ELIRKRVEHMVKLIREKEQELLEMVDRQHRLRNEDLEGKLKQMEAVLKRMGAGEQLVEKM
HLYASDQEVMDMHPFIKESLEELMKLQPLAVGASVQAGDFAECKSKLQALFERVTGERDA
AFCAAPAAPVSEVSSAKDWPGEFTQLRTREQHPVPMLTSNIRETHLGIAPPGKRKPGQAE
KAIQTPPKVLKLESQPKVLERTPSKCDQGLLDWDLQPGPSTSTPSRNCGGAPAARGAVLS
QELGNAYSEPGDQEDSSIVISSSEDTDEDTVLSSMLEGSKDSSLYLQFEWESSAPGSGVV
ASAGFGGSTLVFFDMKVNKDTQMITQLAAANGENSFKAVIQTPESVLSLISQGVSLETGL
EHFLCYLRSVPKPILVVYNFWTSELTVLFKALDSFAKKWDFCTTVCGYLDTLPLIKEKIP
TFGLYKMKNLMRMYLQKPLNDSSALASAKALRDLCKLLEIHTDPDPKPVLSHCNLESYTS
LQPLLQEKLLTRSAAKILAMRSMVLCELQES
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgatggaggaagaatttcaattcctgctttgccaggggtgccggaaagaaccc
acgaatcccaagctcctgtcctgccttcacactttgtgcaccgactgcctggaagagaac
aagcccgttggccagtgccccatctgccaggctcccatcccacaagtcagtgggatccca
gaccaggacaacctgctctttgccaatctgcaggccaagctgagcacctaccagaagatt
gtcagcagcagcgacttggtctgtgacctttgcaacgatctggccgagttctggtgctct
gagtgtgaggaattcttttgcatcagatgctttgaggcccaccagtggttctcgaagaaa
aaaagccatgaaaccaggaaggtgagggagctgaaggcagaatctgccaaacagtttctg
gagggagcaaggaagtccagaatcctcttctgttccaatcccactcataatgaccagaac
tatattacaagtagtatctactgcagaggatgtttaaagcctctctgctgttcctgtgcg
ctcctggatagtgagcattcaaaactctactgcaacatccagacggaaatcgagcggcgg
caggaggagctggggagcctgagcgaagagctgaagaggaagaaggcccactttgaagat
gtctataaaagcctaaagggcaaagctgaccacatagaccaggtgaggactgaaaaccag
gagctgatccgaaagagagtcgaacacatggtgaagctgatccgagagaaggagcaggag
ctgctggagatggtggacaggcagcaccgcctgcggaacgaggatctggaggggaagctg
aagcagatggaagccgtgctcaaaaggatgggggctggtgagcagctagtggagaagatg
catctctatgcatcggaccaggaagtgatggacatgcaccccttcatcaaggagtcctta
gaggagctcatgaagctgcagcctctggcagtgggagccagtgtccaggctggagacttc
gccgagtgtaaatccaaactccaggctctgtttgaaagagtgactggggagagagatgct
gccttctgcgctgccccagcagctccagtgagtgaagtgtcttcagctaaggactggcca
ggggagtttactcagctcaggacccgagagcagcacccggttcccatgcttaccagcaac
atccgggagacgcacctgggcatagctcccccggggaagaggaaaccaggccaagctgaa
aaggccatccagacacctcccaaggtgctgaagcttgaatctcagcccaaggtgctggag
agaacccccagcaagtgcgaccagggcttgctagactgggacctgcagcctgggcccagc
acctcaacacccagcagaaactgcggaggggctcctgcagcgaggggcgctgtgctctca
caggagctgggaaacgcctactctgagcccggagatcaagaagactccagcatcgtgata
agcagttctgaagataccgacgaagacacggtgctctccagcatgctagagggcagcaag
gactcctccttatacctgcaattcgaatgggaaagcagtgcgccaggctctggggtcgtg
gccagcgctggctttgggggaagcacgctggtgttcttcgacatgaaggtcaacaaagac
acacagatgatcactcagctggctgcagcaaatggagaaaacagctttaaggctgtgata
caaaccccagagtctgtgctcagtttgatttcacaaggcgtctcccttgagacagggcta
gagcactttctctgctacctccgctctgttcccaagcccatcttagttgtatataacttc
tggacatcggagctcactgttctctttaaagccttggattcttttgccaagaaatgggac
ttctgcacaactgtctgtggttacctggacaccctgcccttaattaaggaaaagattccc
acatttggtctttataaaatgaagaacctgatgagaatgtacctgcagaagccactgaac
gacagcagcgctctggcatcggcgaaggccctaagggatctgtgtaaacttctggagatc
cacacagatccagatccgaagccagtactgtctcattgcaacctcgaatcttacacttcc
ctccagcctttgctgcaggagaaattgctcaccaggtctgccgcaaagattctggcaatg
cgcagtatggtcctctgtgaactgcaggagtcatag
DBGET
integrated database retrieval system
