Trachemys scripta elegans (red-eared slider): 117884168
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Entry
117884168 CDS
T07347
Name
(RefSeq) protein PML-like isoform X1
KO
K10054
E3 SUMO-protein ligase PML [EC:2.3.2.-]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04144
Endocytosis
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117884168
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117884168
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117884168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117884168
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117884168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PML_CC
ANCHR-like_BBOX
zf-B_box
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Exonuc_VII_L
Prok-RING_4
Lipase_GDSL_3
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
117884168
NCBI-ProteinID:
XP_034640237
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All DBs
Position
10:39890369..39913158
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AA seq
779 aa
AA seq
DB search
MALLSQGSPGSLQTQVMEEEFQFLLCQGCRKEPRNPKLLSCLHTLCANCLEENKPVGQCP
ICRAPIPQASGIPDQDNLLFANLQAKLSTYQKIVKGNDLVCDNCGQEGEFWCSDCEEFLC
VKCFETHQRYLKRESHEAKAVRDLKVGSAREFLVGSRKLSNLSCPNPTHANQMLSIYCRE
CQKPICCICALLDSRHTGKHCDIKVEIQQRQQELGSMREELKKKEELFQDAYCNLKSKAD
HLDQVRNETQELIRKRVEQMVQLIREKEQELLEMVERQHHLGNEELEGKLQQTEAVLKRM
GASKQLVEKMHLYALDQEVMDLHSFIMGSLEELRKLQPLAVGASVQAGGFAKCKARLQAL
FERVTGEREAAPDNSSKAPSLSLPAKRKGVQTEVPAKVIKTEADAGKWEQSARKHQQNLL
EQPGTSSSTASSSSCVTDRFSAAKVADLLENNIYEPCEPDDPCLDSSEGDDSDEESTDSS
RPDDINSVNCESSEGDLLAFPAGSPKELNTRQASLLFFDLKFLTANKVLQLAVVDGEKSF
TILIQPLKSLPGLISKGGVCEIGVKTLFRYLCSVHKPILAGYDLWSPALPVLFQSLDLLS
KKEEFSAAVFGFLDILPLIKEKIPKAGSYKLKNLANTYIWRQLSDDSPLDNAKALRDLCT
VLEVDPVEDPRPVLTCFNLECYASLQPLLNEKLLTKPSVQMLSMHNMSLSKLHTLYMRDP
EKGLQKFCRFFNSRLPSSEKKIRKLSKIKAHFQSPQPSAGHQAAAANELPQAIKSEPDY
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttgtcccaggggagcccaggcagcctgcagacccaggtgatggaggaagaa
ttccagttcctgctctgccagggatgccggaaagaacccagaaatcctaagctcctgtcc
tgccttcacaccttgtgcgccaactgcctggaagagaacaagcctgttggccagtgcccc
atctgccgcgctcccatcccacaagccagtgggatcccagaccaggacaacctgctcttt
gccaatctgcaggccaagctgagcacctaccagaagatcgtcaaaggcaatgacctggtc
tgtgacaactgtgggcaagagggagagttctggtgctctgactgcgaggagttcctttgt
gtcaagtgctttgagacccaccagaggtatctaaagcgagagagccatgaggccaaggcg
gtgagggatctcaaggtgggatctgccagggagtttcttgttggttccaggaagctcagt
aacttgtcctgtcccaatccaacccatgcaaaccagatgctgagcatctattgcagagag
tgccaaaaaccgatctgctgcatctgtgccctgctggacagccggcacacaggcaagcac
tgtgatatcaaggtggaaatccagcagaggcagcaggagctgggaagcatgagggaagag
ctgaagaagaaggaggaactcttccaagacgcctattgtaatctgaagagcaaggctgac
cacctggaccaggtgaggaatgaaacccaggagctgatccgaaagagagttgagcagatg
gtgcagctgatccgagagaaggagcaggagctgctggagatggtggagaggcagcaccac
ctggggaacgaggagctggaggggaagctgcagcagacagaagccgtgctcaagaggatg
ggggccagcaagcagctggtggagaagatgcatctctatgcgttggaccaggaggtgatg
gacctgcactccttcatcatggggtcactggaggagctcaggaagctgcagcccttggcc
gtgggagccagtgtccaggctggaggcttcgccaagtgtaaagccagactccaggctctg
tttgaaagagtgactggggagagagaagctgccccagataattccagcaaggccccatcg
ttgtctttaccagcgaagaggaaaggagtccaaactgaggtccctgcgaaggtgatcaag
actgaagctgatgcaggcaaatgggagcaatcagcaaggaagcaccagcagaatttgctg
gaacaaccggggaccagctcctcaacagcaagcagctcttcatgtgtgactgataggttc
agtgcagccaaagtagctgacttgctggaaaataacatctacgaaccatgtgagccagat
gatccctgtttggacagctctgaaggggatgacagtgatgaagagtcaacagactctagt
cggccagacgacatcaacagcgtcaattgtgagagcagcgagggagatctcctggccttt
cctgccggcagcccgaaggaactcaacacgagacaagcatcactgctcttctttgacctc
aagttcttgacagcaaataaggtccttcagctggctgtggtggatggagaaaagagcttt
accatcttgattcagccgctgaaatctttgcctggcttgatctcaaaaggtggcgtctgt
gagattggtgtgaagaccttattccgctacctctgctctgtccacaaacccatcttagca
gggtatgacctctggtcaccagcccttcctgtcctgtttcaatccctggatctccttagc
aagaaagaggagtttagtgcagctgtctttggtttcctggacatcttgcccctgattaaa
gagaagatccccaaggctgggagttacaaactgaagaacctggccaacacttacatttgg
cggcagctcagtgatgatagccccctggataatgcaaaggccctaagggatctgtgcaca
gttctggaggttgatccagtggaggacccaaggcctgtgctcacctgctttaatctggaa
tgttatgcgtcccttcagccattgctgaatgagaaacttctcactaagccttcggtgcag
atgctgtccatgcacaacatgagcctttccaagctccacaccttatacatgagggaccct
gagaaagggctgcagaagttctgcagattcttcaattctcggctgccgagctctgagaag
aaaatccgaaagctaagtaagatcaaagcccatttccaaagcccacagccatcagctggg
caccaagcagcagcagcaaatgaactgccacaagcaataaagagtgagccagactactga
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integrated database retrieval system
