Trachemys scripta elegans (red-eared slider): 117885079
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Entry
117885079 CDS
T07347
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117885079 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117885079 (GLI2)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117885079 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
117885079
NCBI-ProteinID:
XP_034642103
LinkDB
All DBs
Position
11:7419049..7668431
Genome browser
AA seq
1522 aa
AA seq
DB search
METSNSTAAGKKEGKGAILEGNGFPETGKKPAPLAAAAQGVPQHVFPAFHAPLPIDMRHQ
EGRYHYEPHSIHAIHGPPTLSGSPVISDISLIRLSPHPAGPGESPFNPPHPYMNPHMEHY
LRTVHSSPTLSMISAARGLSPADVAHEHLKERGLFGLPPPPPGANPADYYHQMTLMASHP
NPYGDLLMQSGGAASTAHLHDYLSPVDVSRFSSPRVTPRLSRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASGSYGHLSAGAISPAFSFPHPINPVTYQQILSQQRGLS
SAFGHTPPLIQPSPTFPPRQHMAVISVNPAPAQISNNSSCISDSNQNKQSSESAVSSTVN
PVIHKRSKVKTEVEGMPPASPATQEHLTDLKEDLDKDECKQEPDVIYETNCHWEGCIKEY
DTQEQLVHHINNDHIHGEKKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKPHKCTFE
GCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKI
PGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHPRPPPLKENGDNEASAKQSSKVSE
DSTEANSTTRGMEDCLQVKTIKTENSVMCQSSPGGQSSCSSEPSPLGSTNNNDSGVEMNM
HSGGSLGDLTALDDNAPVVDSTVSSGNSTVSLQLRKHMTTMQRLEQLKKEKLKTVKDSCS
WVSPAPQVRNTKLPPIPGNGSILENIGGSSATLPNPRITELSVNEITMLNQLNERRDSTT
STISSAYTVSRRSSGISPYFSSRRSSEASQFGNRPNNTSSADSYDPISTDASRRSSEASQ
CSGIPGLLNLTPAQHYRLKAKYAAATGGPPPTPLPNLERMSLKNKISLLDGPDPALPSFR
LPPGPRRCSDGSTYGYAAAPAFPHDVAGNNTRRASDPVRRPAADPLSLPRVHRFHSTNSM
NPLHPPHPADRRNCSLPNYTRSDGSLPRHVYSPRPLSISENITMEAMSGETEGPIGEDDI
MLPDDVVQYIKSQNNGTAVENTSMGYSNEMLNFQGNGKLQHQNLSSQHRMAATDASVNHL
GPGVTECHMSFGAPSNMSKNNMPVQWNEVSSGTVDVMSNQSKQQFSQGNLAVVQQKQNFG
QYQNFNQQQMQMSQSGMNVTQQNFMQRNVSMDGQRLNCMQLRQQQINPGPNMNSDLSLHQ
GYNQAHQMLSPNAISGDPNQLSPSCSNMVVKSGSHVHPQQMDVATDPSLMVNSHRLTQVM
HEQSQQNYSSQTNPMNFSMTQEVFYQPPSLMTSNQSNFEPQQSIMGSASQTYPPGMVQPH
PPPDPSPVNRHRGIRNMQQLGYMRTPHPTNAMSPGQETAKATPKRTNNMVSMQAQQCANS
TRENNLMCYYGQIHMYEQNGNFDNHVDCRVGQQQCALNIKPAAMPSPGANQVSSTVDSQG
LEPAQIDFDAIMDDGDHSSLMSGTLSPSILQNLSQNSSRLTTPRNSLTLPSIPAGISNMA
IGDMSSMLTTLAEESKFLNMMS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttccaattcaactgctgctgggaagaaagaagggaaaggtgcaattctggag
gggaatggctttcctgagacggggaagaaacctgctcccttagcagcagcagcacaagga
gttccgcagcacgtttttccagcgttccatgctcccttgccaattgacatgcgtcaccag
gaaggaaggtaccattatgaacctcactccatccatgctattcatgggcctcctaccctc
agtggcagccccgttatctccgacatctcccttattcgcctttctcctcacccagcagga
cctggtgaatcgcctttcaacccccctcacccatacatgaacccccatatggaacattac
ctccgcaccgtgcacagcagtcccactctctccatgatctctgctgccagaggcctcagc
cctgctgatgtggctcatgagcatctaaaagagagaggcctctttggtttgccgcctccc
cctccaggagccaaccctgccgactactatcaccagatgacgctcatggccagccatccg
aatccttatggggacctcctgatgcagagtgggggagcagctagcacggcgcatcttcat
gattacctcagccctgtagatgtgtcaagattttcaagcccaagggttactccgagatta
agcagaaagcgagccctctccatatccccgctgtctgatgccagcattgatcttcagaca
atgatcaggacctccccgaactccctggtggcttatattaataactccagaagtagttcc
gctgctagtggctcctacggccatttatctgcaggggcaataagtccagcattcagcttc
ccccatcccatcaacccagtgacttaccagcagatcctgagtcaacagagaggcttgagc
tcagcatttggacatacaccacctttgatccagccatcccccacgttccctccacgacaa
cacatggcagttatctctgtcaacccagctcccgctcagatcagtaataacagcagctgc
atctctgactctaaccagaacaagcagagcagtgagtcagccgtgagcagcacagtcaat
ccagtaattcacaagcgcagcaaagtcaagactgaagttgagggtatgccaccagcttcc
ccagccacacaggagcatctgacagacctgaaagaagatctggataaggatgaatgtaaa
caagagcctgacgttatttatgagacaaattgtcactgggaagggtgcataaaggaatat
gacactcaggagcagctcgtccatcacatcaataacgatcacatccacggggagaagaag
gagtttgtctgccgctggcaagactgcactcgggagcagaagccattcaaggctcagtac
atgttggtggtgcacatgcgaagacacactggagaaaagccacacaagtgcacgtttgag
ggttgcgccaaagcctattctcgactggagaacttaaagacacacctgagatctcacact
ggagaaaagccgtacgtctgtgaacatgagggctgcaataaagccttttccaacgcttcg
gacagagcaaagcaccagaacaggacgcattccaatgagaaaccctatgtctgtaaaatc
ccgggctgcacaaagagatacacggaccccagttccctcaggaaacacgtcaagactgtg
catgggcccgatgcccatgtcacaaagaaacagcgcaacgacgttcacccacggccacct
cccctcaaggaaaatggcgacaacgaagcaagtgccaagcagagtagcaaggtgtcagaa
gacagcaccgaggctaacagcaccaccagaggcatggaggactgcttacaagtcaaaaca
ataaagaccgagaattctgtgatgtgtcagtccagtcctggtggccagtcatcatgcagc
agtgaaccatcaccacttggtagcaccaacaacaatgacagtggagtagaaatgaacatg
cacagtgggggaagcctgggagacctgaccgcactggatgacaacgctcctgttgtggac
tcgacagtctcatcgggcaattcaacagtcagccttcagctaaggaaacacatgacaacg
atgcagcgacttgaacagctcaagaaggagaaactcaagacggttaaggattcctgctca
tgggtgagcccagctccacaagtcagaaacaccaagctgcctcccataccaggaaatggc
tctatcctagaaaatattggtggttcctctgctacactgcctaatcctagaataacggag
ctgtctgtaaatgagattacgatgctgaaccaactcaatgaacgccgcgacagtacgaca
agcaccatcagctcggcctacactgtgagtcgcagatcatcggggatttccccttacttc
tctagtcgccgttccagcgaagcttcgcagtttgggaatcgtcccaacaacacgagctct
gccgactcctacgaccccatttctacggacgcgtcacgcagatcgagcgaagccagccag
tgtagcggcataccaggccttctcaacctcacgccagctcagcactacaggctgaaagcc
aagtatgctgctgccacggggggccctcctcccacacctctacctaacttggaaagaatg
agtctgaagaacaagatctctcttctcgatgggccagatcctgctttgccttcatttcgc
ctccctcctgggccaagacgctgtagcgatggcagcacttacgggtacgcagcagccccg
gcttttccccatgacgtggcaggtaacaacacaagacgcgcgagtgatcctgtgaggaga
cccgccgcagatccactgtccctccctagagtccatcgcttccatagcaccaacagcatg
aatcccctccacccaccacatcctgcggacagaaggaactgcagccttccaaattacaca
cgctctgatgggagccttcccaggcacgtctattcacctcgacctctgagcattagtgaa
aatattaccatggaagcaatgtcaggtgagacagagggccccattggagaagatgacatt
atgctgccagatgatgtagtgcaatatatcaaatctcagaacaatgggacagctgtagaa
aacacttccatggggtacagtaatgaaatgctaaacttccaaggcaatgggaaactgcaa
catcagaacttgtctagccagcacaggatggctgcaactgatgcaagcgtgaaccatttg
ggtccaggggtgacagagtgccacatgagctttggtgctccctcgaacatgagcaaaaac
aacatgcccgtccagtggaatgaggttagctcaggtaccgttgatgttatgtctaaccaa
tcgaagcaacagttttctcaaggaaacttagctgttgtccagcagaagcagaactttggt
cagtatcagaactttaaccagcagcaaatgcagatgagtcaaagcggcatgaatgtaaca
cagcagaattttatgcaaagaaatgtgagcatggatggacaaaggctaaattgtatgcag
ctgaggcagcagcagataaatccaggccctaatatgaactccgatttgagcctgcaccaa
gggtataaccaggctcatcaaatgctgagcccaaatgcaatcagtggagatccaaaccag
ctttccccttcttgtagcaacatggtagtgaagtctggatcccacgttcatcctcagcaa
atggacgttgcaacagatccctctttaatggtcaacagtcatagactgactcaggtcatg
catgaacaaagtcagcagaactattcatctcagacaaatcccatgaatttctccatgact
caggaggtgttttatcagcccccttctttaatgacctcaaatcagtcaaactttgagccc
caacagagcataatgggttcagctagccagacctaccctcctggaatggtacagcctcat
cctccacctgaccctagtccagtaaacaggcatagagggatacgcaacatgcagcaactc
ggttacatgagaactccccaccctactaacgccatgagccctggccaggaaacagcaaag
gccactccgaaaagaaccaacaatatggtgtcaatgcaggctcagcaatgtgcaaacagc
acgagggaaaacaatttgatgtgctattatggtcaaatccacatgtatgaacaaaatgga
aactttgataaccatgtggactgtagagtgggacagcagcagtgtgccttgaatatcaag
ccagctgccatgccgtctcccggagctaaccaggtgtcaagcacagtggactcacagggt
ctggagcctgcgcagatagattttgatgccatcatggatgatggagaccattcaagcctg
atgtcaggaaccctcagccctagcattctgcagaatctctcccagaattcctctcgcctt
acaactccacggaactctctgacactgccgtccataccagctggaataagcaacatggcg
ataggcgacatgagctccatgctaaccaccctggcagaagagagtaaatttcttaacatg
atgtcctaa
DBGET
integrated database retrieval system
