Trachemys scripta elegans (red-eared slider): 117885823
Help
Entry
117885823 CDS
T07347
Symbol
ITCH
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy homolog isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04144
Endocytosis
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117885823 (ITCH)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117885823 (ITCH)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117885823 (ITCH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117885823 (ITCH)
04121 Ubiquitin system [BR:
tst04121
]
117885823 (ITCH)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117885823 (ITCH)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117885823 (ITCH)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
HECT type E3
117885823 (ITCH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117885823
NCBI-ProteinID:
XP_034643201
LinkDB
All DBs
Position
12:complement(26137568..26266543)
Genome browser
AA seq
879 aa
AA seq
DB search
MAGSGPRSGTVSGFAMKSQLQITVISAKLKENKNKWFGPSPYVEVSVDGQSKKTEKCNNT
NSPKWKQYLTVIVTPVSKLNFRVWSHQTLKSDILLGSATLEIHETLKSNNMKLEQVVVTL
QLVGDREPAEVIGDLSVCLDGMQVDPELLTNGDATSIRSPTQNDGSRARNDTRANANGLE
SYEDAGSSESRTVNGSDSLVLTNGVFKPARPPRPSRPPPPTPRRPSSAAGCVNGPSSMSI
ENDESSAGSSPSTTPNAPSEQSPEGATAGTTVPAASALTTPPVSRQVQPVNPPSQPHSTV
SQGPLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPEPLPPGWERRVDNMGRIYYVDHFTRT
TTWQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIYGNQDVTPTQNAEFDPLGTLPHGW
EKRTDSNGRVYFVNHNTRITQWEDPRNQGQLNEKPLPEGWEMRFTVDGIPYFVDHNRRTT
TYIDPRTGKSALDNGPQIAYVRDFKAKVQYFRFWCQQLAMPQHIKITVSRKTLFEDSFQQ
IMSFSPQDLRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYVGKDNYCLQI
NPASYINPDHLKYFRFIGRFIAMALFHVRFIDTGFSLPFYKRILNKPTGLKDLESVDPEF
YNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGSNILVTEENKEEYIRLVAEW
RLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHTIYRHYTR
TSKQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENW
LPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggctggcagcgggccaagatcaggaactgtcagtggatttgccatgaaatcacagctt
cagattactgttatctcagcaaaattaaaagaaaataaaaataaatggtttggacctagc
ccttatgtggaagtctcagtagatggacagtcaaagaagacagaaaaatgcaacaataca
aatagtccgaagtggaagcaatatcttacagtaattgtcactcctgtcagtaaattaaac
tttagagtctggagccatcagacattaaagtctgatattctactgggtagtgctactctg
gagattcatgagacattgaaatcaaacaatatgaaactggagcaggtggttgtgacattg
cagcttgtcggtgaccgagaaccagcagaggtgataggagacttgtctgtttgtctagat
gggatgcaggtagatcctgagctcctaactaatggtgatgccacaagtataagaagtccc
acgcagaacgatggttccagagcaagaaatgacacaagggctaatgcaaatggccttgaa
agctatgaggatgcaggatccagtgaaagcaggactgttaatggcagtgattcgctggta
ctcacaaatggagtctttaaacctgctaggcctcccaggccctcccgaccacctccaccc
actcctcgtagaccctcttctgcagctggctgtgtcaatggtccttcatctatgtccata
gaaaatgatgagtccagtgcaggatcttcaccaagtacaactccaaatgcaccttcagaa
cagagccctgagggggcaacagctggaacaacagttcctgcagcttccgctttgaccacg
cctccagtatccagacaagtccagccagtaaatcctccatctcagccacacagtactgtc
agtcaaggtcctcttccacctggatgggagcaaagagtggaccagcatggtcgagtatac
tatgtagatcacgttgaaaaaaggacaacgtgggatcggccagaacctcttcccccaggc
tgggaacgacgagttgacaacatggggagaatttattatgtcgaccacttcactagaacg
acaacatggcaacgaccaacattggaatctgtccggaattatgagcaatggcaacttcaa
cgcagtcagcttcaaggagctatgcaacagtttaatcagaggttcatatacgggaaccaa
gatgttacccccacacagaatgcagagtttgatcctcttggcaccctgccacatggatgg
gaaaagagaactgacagcaatggcagagtgtattttgtcaatcacaacacacgtatcact
caatgggaagaccccagaaatcagggtcagttaaacgagaaacccttgccagagggctgg
gaaatgagatttactgtggatggcattccctattttgtggatcacaatagaagaactaca
acgtatatagatccccgcactggaaaatctgctctagataatgggccccagatagcctat
gtgcgtgacttcaaagcgaaggtccagtatttccggttctggtgtcagcaactggctatg
ccacaacacataaagattacagtgtccagaaagacattgtttgaggactcatttcagcag
ataatgagcttcagccctcaggatctgcgaagacgcttgtgggtcatttttcctggagaa
gaaggtttagattatggaggtgttgcaagggaatggttctttctgttgtcacatgaagtg
ttgaacccaatgtattgcctatttgaatatgtagggaaggataactactgcttacagata
aacccggcttcttatattaatccagaccacctgaaatatttccgttttattggcagattc
attgctatggctttgttccatgtgagattcatagatacaggtttctctctgccattctat
aagcgtatcctaaacaagccaacaggactcaaggatttagaatctgttgatccagagttt
tacaactctctcatctgggtaaaagaaaacaatattgaagaatgtggcttggaaatgtat
ttctcagtggataaagaaattctaggtgaaataaagagccatgatttgaaacctaatggt
agcaacattctggtcacagaagaaaataaagaagaatatattaggctggtagcagaatgg
agactctcccgaggtgttgaagaacagacacaagctttctttgaaggcttcaatgaaatt
cttccacagcagtacttgcagtactttgatgccaaggaactagaggtgcttttatgtgga
atgcaagagattgacttgaatgactggcagagacacaccatctatcggcactacaccagg
acgagcaaacagattatgtggttttggcagtttgtgaaagaaatagataatgagaagaga
atgcgactattgcagtttgttacaggaacatgcagattaccagttggaggatttgctgac
ctcatggggagcaatggaccccaaaagttttgtattgaaaaagttggaaaagaaaactgg
ttacctagaagtcatacttgtttcaatcgcttggacctgccaccctacaagagttatgag
cagttgaaggaaaaattattatttgcaattgaagaaacagaaggatttgggcaagagtaa
DBGET
integrated database retrieval system
