Trachemys scripta elegans (red-eared slider): 117886137
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Entry
117886137 CDS
T07347
Symbol
MMP9
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117886137 (MMP9)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
117886137 (MMP9)
Peptidases and inhibitors [BR:
tst01002
]
Metallo peptidases
Family M10
117886137 (MMP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
117886137
NCBI-ProteinID:
XP_034643668
LinkDB
All DBs
Position
12:complement(764759..773716)
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AA seq
689 aa
AA seq
DB search
MGLTLLAPLAMGLLALTCWAAPLHSKPQAVITFPGELVSNRTDLQLAESYLLRFGYTESE
GQTRSRQLSMGKALRRMQKQLGLQETGELDASTMEAMRAPRCGVPDVGTFLTFEGDLKWD
HNDLTYRVINYSPDLDASVIDDAFARAFKVWSDVTPLTFTRLQSGEADIMIQFGAQEHGD
GYPFDGKDGLLAHAFPPGKGVQGDAHFDDDEFWTLGTGIVVKTSYGNANGAACHFPFTFE
GQSYSTCTSEGRSDGLPWCATTANYDTDKVYGFCPSELLYTYDGNSDGAKCVFPFIFEGK
SYDACTTEGRSDGYRWCATTASFDQDKKYGFCPNRDTAVIGGNSQGDPCVFPFTFLGQTY
SACTSEGRQDGKLWCATTSNYDTDHKWGFCPDQGYSLFLVAAHEFGHSLGLDHSSVREAL
MYPMYSYIKDFHLHPDDVSGIQFLYGQGSGPAPTTQAPDIPDQATTQAADTTTTAEPDTA
TDDDYPLPTEPSPVDPSSDACKVNSFDAITEINGELHFFKGGNFWKSSVSRKGAIQGPFR
ISATWPALPALIDAAFQDLLTKKLYFFSGRRFWVYMGSSVTGPRGIEKLGIGKEAERISG
ALQRGRGKVLLFSGEKYWRMDVKVQKVDKGYPRLTDDTFAGVPLNAHDVFLYQGKYHFCQ
DRFYWRMTPRYQVERVGYVKYDILNCPEQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggggctcactctcctggccccgctcgccatggggctcctggccctgacctgctgggct
gcaccactccactccaagccccaggctgtgatcactttcccgggggagctggtcagcaat
cggacggatctgcagcttgcagaaagctacctgctgcgcttcggctacacggagtccgag
gggcagacccgcagcaggcagctatccatgggcaaggcactccggaggatgcagaagcag
ctgggcctgcaggagacgggggagctggacgccagcacgatggaggccatgcgagcacct
cgctgcggcgtccccgacgtgggcacattcctcaccttcgaaggagacctcaagtgggat
cacaatgacctcacttaccgggtaataaactactccccagacctggacgcctctgtgata
gacgatgccttcgcacgagccttcaaggtgtggagtgacgtgaccccgctcaccttcacc
cggctgcagagcggcgaggccgatatcatgatccagtttggcgcccaggagcacggtgac
gggtatccgtttgacgggaaggacggacttctggcccacgctttcccccctggcaaaggg
gttcagggagatgcccacttcgatgacgacgagttctggacgctgggaacagggatagtg
gtgaaaaccagctacgggaatgccaacggggccgcctgccacttccccttcaccttcgag
ggacagtcctactccacctgcacctcagaggggcgctccgacgggctgccctggtgcgcc
accaccgccaactatgacacggacaaggtctacggcttctgccccagcgagcttctctac
acctacgacggcaacagcgacggtgccaagtgcgtcttccccttcatcttcgaggggaag
tcctatgatgcctgcaccacagaagggcgctctgacggctaccgctggtgcgccaccacc
gccagcttcgaccaggacaagaaatacgggttctgccccaacagagacacagctgtgatt
ggcgggaactcccagggcgacccgtgtgtgttcccattcaccttcctgggccagacatac
agcgcatgcaccagcgaggggcggcaggacgggaagctctggtgtgccaccaccagcaac
tacgacaccgaccacaagtggggcttctgtcccgaccaaggttacagcctcttcctggtt
gctgcccatgagttcggccattctctgggcctggaccactcgagtgtccgcgaggccttg
atgtaccccatgtacagctacatcaaggacttccacctgcacccagacgatgtcagcggc
atccaattcctctatggccagggctctggtcctgcaccaacgacccaggcgccagacatc
cctgaccaggcaaccacgcaagccgcggacaccacaaccacagcagagcctgacacagcc
acggatgatgactatcccttgccaactgagcccagccctgtggaccccagcagtgatgcc
tgcaaagtgaattccttcgacgccatcaccgagatcaacggggagctgcatttcttcaag
ggcgggaatttctggaaaagctctgtatcccggaagggggcgattcagggcccattccgg
atctcggccacatggccggcgctcccggccctcatcgacgccgccttccaggacctgctc
accaagaagctctacttcttctcgggtcggcgtttctgggtgtacatgggcagcagcgtg
acgggcccccgcgggatcgagaagctgggcatcggtaaggaggcagagcggatctcaggg
gccctgcagagggggcgcggcaaagtgctgctcttcagtggggagaagtactggaggatg
gacgtgaaagtccagaaggtggacaagggctacccacgtctcactgatgacacctttgct
ggcgtgcccctcaatgcccacgatgtcttcctctaccaaggaaagtaccacttctgccag
gaccgtttctactggcgaatgaccccgcgctaccaggtggagcgggtgggctacgtgaaa
tacgacatcctgaactgcccggagcagtag
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integrated database retrieval system
