Trachemys scripta elegans (red-eared slider): 117886236
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Entry
117886236 CDS
T07347
Symbol
SNRPB
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117886236 (SNRPB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117886236 (SNRPB)
03041 Spliceosome [BR:
tst03041
]
117886236 (SNRPB)
03032 DNA replication proteins [BR:
tst03032
]
117886236 (SNRPB)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
117886236 (SNRPB)
Spliceosome [BR:
tst03041
]
Complex A
U1 snRNP components
Sm proteins
117886236 (SNRPB)
U2 snRNP components
117886236 (SNRPB)
Complex B
U1 snRNP components
117886236 (SNRPB)
U4/U6.U5 tri-snRNP components
117886236 (SNRPB)
Complex C
U2 snRNP components
117886236 (SNRPB)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
117886236 (SNRPB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
117886236
NCBI-ProteinID:
XP_034643792
LinkDB
All DBs
Position
12:complement(204397..208335)
Genome browser
AA seq
240 aa
AA seq
DB search
MTVGKSSKMLQHIDYRMRCILQDGRVFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAGGPGVGRAAGRGVPAGAPM
PQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAAATASIAGAPTQYTPGRGGPPPPMG
RGAPPPGMMGPPPGMRPPMGPPMGMPPGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggggaagagcagcaagatgctgcaacacatcgactatcgcatgaggtgcatc
ctgcaggatggacgtgtcttcatcggcactttcaaggccttcgacaagcacatgaatctg
atcctgtgtgattgtgatgagttccgcaagatcaaacccaagaattcaaagcagccggaa
cgggaagagaaacgggtcctgggtctggtattgctgcgcggagagaacctggtgtctatg
acagttgaggggccacctccaaaagatactggcattgcccgggtgcctctagctggagct
gcaggaggacctggagttgggagggcagctggaagaggagtaccagctggagcccccatg
ccacaggcgccagcagggttagctggtcctgtcagaggagttggaggaccatcccaacag
gtgatgacccctcagggccgtggaacagttgctgctgctgctgctgcagccacagctagt
atagcaggagctcctacccaatacacaccaggccgtggtggtcctccccctccaatgggc
aggggagcacctcctccaggaatgatgggaccacctcctggcatgagaccacccatgggt
ccaccaatgggaatgccacctggccgaggtgcacccatgggaatgcctcccccagggatg
agaccgccgcccccagggatgagaggtcccccaccccccggtatgcgcccaccacgaccc
taa
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integrated database retrieval system
