Trachemys scripta elegans (red-eared slider): 117886242
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Entry
117886242 CDS
T07347
Symbol
CD40
Name
(RefSeq) tumor necrosis factor receptor superfamily member 5 isoform X1
KO
K03160
tumor necrosis factor receptor superfamily member 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04060
Cytokine-cytokine receptor interaction
tst04514
Cell adhesion molecule (CAM) interaction
tst04620
Toll-like receptor signaling pathway
tst04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117886242 (CD40)
04514 Cell adhesion molecule (CAM) interaction
117886242 (CD40)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117886242 (CD40)
04672 Intestinal immune network for IgA production
117886242 (CD40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tst04050
]
117886242 (CD40)
04090 CD molecules [BR:
tst04090
]
117886242 (CD40)
Cytokine receptors [BR:
tst04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117886242 (CD40)
CD molecules [BR:
tst04090
]
Proteins
117886242 (CD40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
SCIMP
Motif
Other DBs
NCBI-GeneID:
117886242
NCBI-ProteinID:
XP_034643796
LinkDB
All DBs
Position
12:complement(599512..612186)
Genome browser
AA seq
336 aa
AA seq
DB search
MLPGCLVCLLGGCLLRHWASGSDLNCTPQEYPHEGRCCHRCAPGLKVRSDCTASRNTECG
QCEERHFQSSWTKERHCTPHRSCDHNAGLDTRSPGDTKHNAECQCQQGMYCSSPDCQTCL
NITACRPGEGVAWKADNFSDTVCMPCEHGTFSNISSSSEPCRPWTSCETLGLVQKMPGTN
HLDVACEPGPGHSRGRFPVLISVMAIIAASLVGLILFCLYQKGLQQHRLKQVRHPAPPTL
PGAGKQLPCTRAVRDLAPSRGFPLPAHRDRLHPAHRALGHFCCPLGWEGQGRARGEDRAS
GERDALGWEPAWALSPWGKRGVVPNPAPRGHRPAVG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggctgcctggtctgtctgctcgggggctgcctgctcaggcactgggcgtct
ggcagcgacttgaactgcaccccacaggagtatccgcacgagggcaggtgctgccaccgc
tgtgcgccagggctcaaggtgcggtctgactgcactgcctcgcggaacactgagtgcggg
cagtgcgaggagagacacttccagtccagctggaccaaggagagacactgcaccccccac
agatcttgcgatcacaacgctggacttgacacgaggagccccggggataccaagcacaat
gccgagtgccagtgccagcagggcatgtactgctccagccccgactgccagacctgcttg
aatatcacggcctgcaggccaggcgaaggagttgcttggaaagccgacaacttttcggac
accgtctgcatgccgtgtgaacatggcaccttctccaacatctcctcctcctccgagccg
tgccgcccctggacaagctgcgagacactggggctggtgcagaagatgcctgggacaaac
cacttggatgtggcttgtgagcctggccctggccacagccgcggccgcttcccagtgctg
atctctgttatggccattattgcagcctctctcgtggggctcattctcttctgcctgtat
cagaaaggtctccagcagcatagactgaagcaggtacgtcaccctgcgccgcctacactc
cccggggcaggaaaacagctgccatgcacccgagcagtcagggacctggccccaagcagg
gggttccccctcccggcccacagggacaggctgcacccggcgcaccgggccctgggtcac
ttctgctgcccgctggggtgggaggggcagggacgggccagaggggaggacagagcaagt
ggagagcgagatgccctggggtgggaaccagcctgggccctgtccccatggggcaaaagg
ggtgttgttccaaaccctgccccgaggggacaccgccctgcggtggggtga
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