Trachemys scripta elegans (red-eared slider): 117886471
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Entry
117886471 CDS
T07347
Symbol
TNFRSF1A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A isoform X1
KO
K03158
tumor necrosis factor receptor superfamily member 1A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04060
Cytokine-cytokine receptor interaction
tst04150
mTOR signaling pathway
tst04210
Apoptosis
tst04217
Necroptosis
tst04920
Adipocytokine signaling pathway
tst05132
Salmonella infection
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117886471 (TNFRSF1A)
04150 mTOR signaling pathway
117886471 (TNFRSF1A)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117886471 (TNFRSF1A)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117886471 (TNFRSF1A)
04217 Necroptosis
117886471 (TNFRSF1A)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
117886471 (TNFRSF1A)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117886471 (TNFRSF1A)
09171 Infectious disease: bacterial
05132 Salmonella infection
117886471 (TNFRSF1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tst04050
]
117886471 (TNFRSF1A)
04090 CD molecules [BR:
tst04090
]
117886471 (TNFRSF1A)
Cytokine receptors [BR:
tst04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
117886471 (TNFRSF1A)
CD molecules [BR:
tst04090
]
Proteins
117886471 (TNFRSF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death
TNFR_c6
DUF4245
HTH_19
Motif
Other DBs
NCBI-GeneID:
117886471
NCBI-ProteinID:
XP_034644208
LinkDB
All DBs
Position
1:143264055..143279354
Genome browser
AA seq
416 aa
AA seq
DB search
MAHPEPSLALVATLILTLAWVWAEECLGVAPNPDTQQIHGTALGRKKREPKCQMGEYLHS
NRTHCCMRCHAGTYLAEDCQSDKHVTTCNRCPKGTFTATDNTLRKCISCQRCRSELQQIT
LSECTEKKDTVCGCLPNQFQSEPNTLFKCKNCNPCHNGTIRKNCAKDSDTICVCHHGYFL
HKNNCNPCSSCNEEECKKDCPAMPSPSTFPSVKNDYWGTQGHTILLIGLVVVLAASLGLL
FAVKLIKQYRQRVSTAIFYSCVSMQQPKKEPVSEVSKVVINERKAATFAPVPPQIENMWT
ANAVPRSMVEQELPDCVRPAGKTQLPDNPVVLYTVADHVLLSRWKEFVRRLGLSDYEIER
IELEQRRVRDAQYEMLRQWRLQMGQGATVERISYVLNQMELSGCSEAIQEALAGQP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcccatccggagccttcccttgccttggtggctacgctcattctaactctggcctgg
gtgtgggctgaagaatgcttgggagtagccccaaacccagatacccaacaaatccatggg
acagccctggggagaaagaagagggagccaaagtgtcagatgggagagtacctacactcc
aacaggacccactgctgcatgagatgccatgcagggacttacttggcagaagactgtcag
tcagacaaacatgtgaccacctgcaaccgctgtcctaagggcacgttcacggctacggat
aacactttgaggaaatgcattagttgccaacggtgccgttcagaattacagcagataaca
ctgtctgagtgcactgaaaagaaggatacagtctgtggctgtctgcccaaccaatttcag
agcgaacccaatactttattcaaatgtaagaactgcaacccatgccacaacgggaccatc
cggaaaaactgtgcaaaggacagtgacacgatctgtgtatgtcaccatggatacttcctg
cacaaaaataactgcaacccttgcagcagctgtaatgaagaagaatgtaagaaggactgt
cccgcaatgccgagtccatcaacgttcccctcagtgaagaatgactactggggcacgcag
ggtcataccatcttactcattggcctcgtcgtcgtgcttgcagctagccttgggctgctc
tttgcagttaaattgatcaagcaataccgtcaaagagtgtcaaccgctattttttactca
tgtgtttctatgcagcagccaaagaaggagccggtatctgaagtaagcaaggttgtgata
aatgagaggaaagctgccacctttgctccggtaccacctcagatcgaaaatatgtggaca
gccaatgctgtgccaaggtcaatggttgaacaggagttaccagattgtgtcagacctgct
ggaaagactcaactcccagacaaccctgttgttctctatactgtggcagaccatgtgctg
ctgtctcggtggaaggagtttgtgcgacgcttggggctgagtgactatgagattgagcga
atcgagctggagcagcggcgcgtgcgggatgcccaatacgagatgctgagacaatggagg
ctgcagatgggccagggtgccacagtagagcgcatcagctacgtcctcaaccagatggag
ctgagtggttgcagcgaggctatccaggaggcgctggccgggcagccctaa
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