Trachemys scripta elegans (red-eared slider): 117886896
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Entry
117886896 CDS
T07347
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00514
Other types of O-glycan biosynthesis
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
117886896 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117886896 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tst01003
]
117886896 (RFNG)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
117886896 (RFNG)
Glycosyltransferases [BR:
tst01003
]
Glycan extension
O-Glycan
117886896 (RFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
117886896
NCBI-ProteinID:
XP_034644877
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All DBs
Position
14:complement(34979450..34990477)
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AA seq
402 aa
AA seq
DB search
MTLSCIGLSKICFLLSVTFCAFLLLLIPKFQTTWRHRGYPQPRPPPPFNASCKSEFHHPQ
AEPSSTGHLDSEGTDIAHSVKDETVEKWGDYSLHAGGSSLKLEEQDGSPTSPLQTMLKDH
HGPAGDSIKENLELKDIFIAVKTTRKYHKTRLDLLFQTWISQAKRQTFIFTDWEDRELRL
RAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGRKWFCHVDDDNYVNPQNLLRLLSAF
SHSQDVYVGRPSLDHPIEAADHVRSDGSTTVKFWFATGGAGFCISRGLALKMSPWASLGN
FISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLRGESVLQQVTLSYGGP
ENKHNVVSVAGVFGLQQDPTRFRSVHCLLYPDTTWCPTKNIL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacactttcctgcattgggctcagtaaaatctgcttcctgctgtccgtgaccttctgt
gctttccttctcctgctaatccccaaattccagactacctggagacataggggctatcca
caaccccgtccaccacctccttttaatgcttcctgcaaaagtgagttccaccacccgcag
gcagagcccagttcaacaggccatttggacagtgagggaactgatattgcacacagtgtg
aaagatgaaactgtagaaaaatggggggattacagcctacatgctgggggatccagcctt
aaacttgaggagcaggatgggagccccaccagtcctcttcaaactatgttgaaggaccac
catggacctgcaggtgattccattaaggagaatctggagctgaaggatatttttattgct
gtgaaaactacaagaaagtatcataaaactaggctggacttgctcttccaaacctggatt
tcgcaggccaaaagacagacgtttatattcacagattgggaggaccgtgaactgcgccta
agagcaggagatcacatgatcaacaccaactgctctgctgttcacacccgccaggcactc
tgctgcaagatgtctgtggaatacgataaattcctcgaatctgggagaaaatggttttgc
catgtggatgatgacaactatgtgaatccacagaatctcctgcgcctcttgtctgccttc
tcacacagccaggacgtatatgtggggaggccaagcctggaccaccccattgaggcagct
gaccatgtccggagtgatggatcaacaactgtgaagttctggtttgccacaggtggagca
gggttctgtatcagcaggggccttgccctgaagatgagtccctgggccagcttgggtaac
ttcatcagcactgcagagagggtgcgtcttcctgatgactgcaccatcggttacatcatt
gaggggctgctggaggtgaagctgctgcacagccccttgttccattctcatctggagaat
ctgcagagactacgaggcgagtcagtgctgcagcaggtcaccctgagttacgggggccct
gagaacaaacacaatgttgtgagtgtggcaggagtgtttggcttgcagcaagatccaacc
cgattcagatctgtccattgtcttctctaccctgacactacctggtgtcccactaaaaat
atattgtga
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