Trachemys scripta elegans (red-eared slider): 117886984
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Entry
117886984 CDS
T07347
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
tst04145
Phagosome
tst04218
Cellular senescence
tst04514
Cell adhesion molecules
tst05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117886984
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117886984
04145 Phagosome
117886984
09143 Cell growth and death
04218 Cellular senescence
117886984
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117886984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117886984
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117886984
Exosome [BR:
tst04147
]
Exosomal proteins
Proteins found in most exosomes
117886984
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Antigens
117886984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
C2-set_3
ig
C2-set_2
Ig_2
MHC_I_3
Trp_oprn_chp
Motif
Other DBs
NCBI-GeneID:
117886984
NCBI-ProteinID:
XP_034645090
LinkDB
All DBs
Position
14:37794578..37799359
Genome browser
AA seq
355 aa
AA seq
DB search
MALVLGLWFCLLGAAGAAGPVAQHSWDILFTGVQGSKGIPNFFVLGQVDGLGVAYYDSTT
LELIPTRDWMRQAVEPGYFRSKTQELLGYKEGFQRIMGRLLERYNQTGGVHTLQLRVGCS
LRDDSPQAGVLQYAYDSQDFIGFDGQRGLWVAAVQPAVLSKRRWEADRPWCLFLQHYLQQ
ECVKTLRSLVRHGRETLGRQLPPEVSVSCRDAPDGSVTLSCHARGFYPRPIHVSWVRDEE
DILAETDSSGILPNADSTYYTQSSLEISLQQDRHRYACRVEHTSLPEPTLIWVPGKKGLL
PPGVLVPLVLAMLAGAGAAVAGVIMWRRNRPGPVGPRYTPTASAAAEDAGPSAAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggccctggtgctggggctctggttctgcctgctgggggcggcaggagctgcgggtcca
gtggcgcagcacagctgggacatcctgttcacgggggtgcagggctccaaggggatcccc
aacttctttgtgctcgggcaggtggatggtctgggggtggcctattacgacagcaccacc
ctggaactgatccccacccgggactggatgcgccaggctgtagagcccggctatttccgg
agcaagacgcaggagctgctggggtacaaagaggggttccagcgcatcatgggccggctg
ctggagcgctacaaccagacgggcggggtgcacacgctgcagctgcgggtgggctgctcc
ctgcgggacgactccccccaagccggggtgctgcaatatgcctacgacagccaggacttc
atcggctttgacgggcagcgggggctgtgggtggcggccgtgcagccagccgtgctgtcc
aagcggcgctgggaggccgaccggccctggtgcctgttcctgcagcactacctgcagcag
gagtgtgtgaagacgctgaggagcctcgtccggcacggcagggagaccctggggcgccag
ctgccccccgaggtctcggtttcctgtagagatgcccccgacggctccgtcaccctctcc
tgccacgccaggggcttttacccacgtcccatccacgtctcctgggtgcgggacgaagaa
gacatcctggcagagacagactccagcgggatcttgcctaacgccgacagcacctattac
acgcagtcatccctggagatctccctgcagcaggacaggcaccgctacgcctgccgggtg
gagcacaccagcctgccggagcccacactcatctgggtccccggtaagaagggcctcctg
ccccctggggtcctggtcccgctcgttctggccatgctggctggggctggtgccgcagta
gccggtgttatcatgtggaggagaaatcgcccaggccctgtcggacccagatacacccca
acagcctcagcggctgcagaggatgctggtcccagcgccgcgtcgtga
DBGET
integrated database retrieval system
