KEGG   Trachemys scripta elegans (red-eared slider): 117888138
Entry
117888138         CDS       T07347                                 
Symbol
RAN
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03008  Ribosome biogenesis in eukaryotes
tst03013  Nucleocytoplasmic transport
tst03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117888138 (RAN)
   03008 Ribosome biogenesis in eukaryotes
    117888138 (RAN)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117888138 (RAN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tst03019]
    117888138 (RAN)
   03009 Ribosome biogenesis [BR:tst03009]
    117888138 (RAN)
   03016 Transfer RNA biogenesis [BR:tst03016]
    117888138 (RAN)
   03036 Chromosome and associated proteins [BR:tst03036]
    117888138 (RAN)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tst04147]
    117888138 (RAN)
   04031 GTP-binding proteins [BR:tst04031]
    117888138 (RAN)
Messenger RNA biogenesis [BR:tst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     117888138 (RAN)
Ribosome biogenesis [BR:tst03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    117888138 (RAN)
  Pre-60S particles
    117888138 (RAN)
Transfer RNA biogenesis [BR:tst03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    117888138 (RAN)
Chromosome and associated proteins [BR:tst03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     117888138 (RAN)
   Spindle formation proteins
    117888138 (RAN)
Exosome [BR:tst04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117888138 (RAN)
GTP-binding proteins [BR:tst04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    117888138 (RAN)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RNA_helicase G-alpha Pox_A32 AAA_24 ArgoMid Septin AAA_7 SRPRB TsaE AAA_16 DUF5906 AAA_22
Other DBs
NCBI-GeneID: 117888138
NCBI-ProteinID: XP_034647176
LinkDB
Position
15:12202931..12209065
AA seq 216 aa
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEQDLQIAQTTALPDEDDDL
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccgcccaaggagagccccaagtgcagtttaagcttgtcttggttggtgatggtggt
actggtaaaacaacatttgtaaaacgtcatttgactggtgaatttgagaagaagtatgta
gctacactgggtgttgaagtccatcctctggtgttccacactaatagaggtccaattaaa
tttaatgtatgggacacggctggtcaggagaaatttggtggtctgcgggatggttactat
attcaggctcagtgtgccatcataatgtttgatgtaacatcaagagttacatacaagaat
gtacctaactggcatagagatctggtacgagtatgtgaaaacatccctatagtgttgtgt
ggcaacaaagtggatattaaggacagaaaagtcaaggcaaagtcaattgtcttccacagg
aagaagaatcttcagtactatgatatctcagctaagagtaactacaactttgagaagccc
ttcctctggcttgccaggaagctaattggagatcccaatttggagtttgttgccatgcct
gctcttgcgcctccagaggttgttatggacccagcattggcagcacagtatgagcaagac
ttacagattgctcagaccactgccctgccagatgaagatgatgacctgtaa

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