Trachemys scripta elegans (red-eared slider): 117888449
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Entry
117888449 CDS
T07347
Symbol
SP1
Name
(RefSeq) transcription factor Sp1 isoform X1
KO
K04684
transcription factor Sp1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04137
Mitophagy - animal
tst04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117888449 (SP1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117888449 (SP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117888449 (SP1)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117888449 (SP1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
117888449 (SP1)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
117888449 (SP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_8
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117888449
NCBI-ProteinID:
XP_034647756
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Position
16:19920472..19953634
Genome browser
AA seq
775 aa
AA seq
DB search
MEPLWNRPEGGEERQDSRDQESPEEMAVVKSEKEEESACSRSSSIGGNGEGQESQPSPLA
LLAATCSRIESPNENSNSSQSQQGGAGELDLTAAAAQLAQTTNGWQIISTVPGTSTSSKE
QGSNGSESSPKNRPVTAGQYVVAAAPNLQNQQVLTSLPGVIPNIQYQVIPQFQTVDGQQL
QFATTPAQVNVQQDASGQLQIIPGTNQQIITNRGGTGNIIATMPNLLQQAVPIQGVGLAN
NALSGQTQYVANVPVALNGNITLLPVSSVAASLAPTSQTVTLSSSGSQDSSSQIATSGAA
ISSSNIVTSLASSGAFFTNANSYSTTTTSSNMGVMNFSSSGTMGTNVQVQTPQRVSGIQN
SDSLQNQVSGVALQQGQQKDADQNQQSQQQILVQPQLVQGGQTIQALQAAPLSGQTFTTQ
AISQDALQNLQLQALPNSGPIIIRTPTVGPNGQVSWQTIQLQNLQVQNPQAQTITLAPMQ
GVSLGQTGHTNTLTPIASASLPSGTVTVNAAQLSSMPGLQTINLSALGASGIQVHQLQGL
PLAIANATGDHGAQLGLHGGGGDGMGDENATVEEGETSPDPQPQGRRMRREACTCPYCKD
SEGRGSGDPGKKKQHICHIPGCGKVYGKTSHLRAHLRWHTGERPFVCSWMFCGKRFTRSD
ELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGTANNVAMNVSAVSMDTG
TSEGNSGPTPSALIATNMVAMEAICPEGIARLASSGINVMQVADLQSINISGNGF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggagcctttgtggaacagacccgagggaggggaggagaggcaagattctagggaccaa
gagagtccagaagaaatggctgttgtgaagtctgagaaggaagaagaaagtgcttgtagt
agaagcagtagtattggaggcaacggtgagggtcaggaatcccagccttcacccctggct
ctgctggcagccacatgcagcaggattgagtctcccaatgagaactccaacagctcccag
agccagcaggggggcgcaggtgagctggacctcacagctgctgccgctcagcttgcccag
acgacaaatggttggcaaatcatttccactgtccctgggacatccacctcctccaaggag
caagggagcaatggcagcgagtcgtcaccaaaaaaccgaccggtgacagctgggcagtat
gtggttgctgctgcccccaatttgcagaatcagcaggtgctgaccagtttgcctggtgtt
atacctaatattcagtaccaggtgatcccacagtttcaaactgttgatgggcagcagctg
cagtttgccaccaccccagcccaagtcaatgtccaacaggatgcctctggccaacttcag
atcatccctgggacaaatcaacagatcattacaaacagaggcgggacaggcaatatcata
gccaccatgccaaatctgctgcagcaggctgtcccaatccagggggttggcttggccaat
aacgccctctcgggacaaactcaatatgtggcaaatgtcccagtggctttaaatggtaat
atcaccttgctgcctgtcagcagcgttgccgccagtctggcgcccacttctcagaccgtc
actttaagtagctctggctctcaagacagcagctctcaaatagcgacttctggtgctgca
atcagctcttccaacatagtgacgtccctggccagctctggtgcttttttcaccaatgcc
aacagctactctaccacgaccaccagcagtaacatgggtgtcatgaatttttccagcagt
gggaccatggggacaaacgttcaggtccagacaccccagagggttagcggcattcagaat
tcggactctctacagaaccaggtttctggcgtggcacttcagcaaggtcagcagaaggat
gccgatcaaaatcaacagtcccagcagcagatcctagtacagcctcagcttgtccagggg
gggcaaaccattcaggccctccaagctgctccactctctggccagacctttaccacccaa
gccatctcccaagatgctttgcagaaccttcagcttcaagcactccccaactctgggcca
atcattattcgaacacctactgtggggccaaacgggcaggtcagctggcagactattcag
ctgcagaatcttcaggtgcagaatccccaagctcagacaatcaccttggccccaatgcag
ggagtatctctggggcagacggggcacaccaacacgctcacaccaatagcctctgcctcg
ctccccagtggcactgtcactgtgaacgccgctcagctgtcttctatgccaggccttcag
accattaacctcagtgccttgggagcgtctggaatccaggtacatcagctacaagggctg
ccgctggctatagcaaatgccactggtgatcatggtgctcagctgggcctgcacggtgga
gggggtgacggaatgggagacgaaaacgctactgtggaagaaggagagactagtcccgac
ccacagccacaaggccgaaggatgcggagggaagcctgcacctgcccatactgcaaagac
agcgaaggaaggggttctggagatcccggtaagaagaagcagcacatctgccacatcccg
ggctgcgggaaggtgtatggcaagacgtcccacctgcgggctcacctccggtggcatacc
ggggagaggcctttcgtctgcagctggatgttctgcgggaagcgcttcacgcgcagtgac
gagctgcagcggcacaagcgcacgcacacaggtgagaagaaatttgcctgcccggagtgc
ccaaaacgcttcatgaggagcgatcacctgtccaaacacatcaagacccaccaaaacaag
aagggaggcacagccaacaatgtggccatgaacgtctctgcagtctccatggacaccggg
acttcggagggaaacagtgggccaaccccatcggccctcatcgcaaccaacatggtggcc
atggaagccatttgtcccgagggcatcgcacgccttgccagcagcggcatcaacgtcatg
caggtggcagatcttcagtccatcaacatcagtggcaatggattttga
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