KEGG   Trachemys scripta elegans (red-eared slider): 117888586
Entry
117888586         CDS       T07347                                 
Name
(RefSeq) hepatic lectin-like
  KO
K06563  C-type lectin domain family 4 member L/M
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03260  Virion - Human immunodeficiency virus
tst03264  Virion - Flavivirus and Alphavirus
tst03265  Virion - Ebolavirus, Lyssavirus and Morbillivirus
tst03273  Virion - Lassa virus and SFTS virus
tst04145  Phagosome
tst04625  C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03260 Virion - Human immunodeficiency virus
    117888586
   03264 Virion - Flavivirus and Alphavirus
    117888586
   03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
    117888586
   03273 Virion - Lassa virus and SFTS virus
    117888586
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    117888586
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    117888586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tst04131]
    117888586
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:tst04054]
    117888586
   04515 Cell adhesion molecules [BR:tst04515]
    117888586
   04090 CD molecules [BR:tst04090]
    117888586
   04091 Lectins [BR:tst04091]
    117888586
Membrane trafficking [BR:tst04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    117888586
Pattern recognition receptors [BR:tst04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   117888586
Cell adhesion molecules [BR:tst04515]
 Lectins
  Selectins and C-type lectins
   117888586
CD molecules [BR:tst04090]
 Proteins
  117888586
Lectins [BR:tst04091]
 C-Type lectins
  Asialoglycoprotein and DC receptors
   117888586
SSDB
Motif
Pfam: Lectin_C
Other DBs
NCBI-GeneID: 117888586
NCBI-ProteinID: XP_034648011
LinkDB
Position
16:complement(22800647..22808689)
AA seq 208 aa
MDKDRLQDELHMFRDRNYLRQKLRSSRTVYVLLALSYLLILILFAVSLSRVSMLSSQLNE
MRNEVKRNHSSNDFKLFPCGPEAREWEYFSGKCYFFSLRETSWQRAKVLCEEEHSRLAII
NSRTKQNFIMYRTRNQRFWIGLSDQNSEGEWKWIDGSDSTTGFTYWKEGEPNNSGQNEDC
AHVWTYGEWNDVHCTYECYYICEKPAPP
NT seq 627 nt   +upstreamnt  +downstreamnt
atggacaaggacaggcttcaagatgagctgcacatgtttagagacagaaactacctccgg
cagaagctgagatcctcccgcacagtctacgtgctgctggcgctttcttacctgctgatc
ctcatcctgtttgcggtgtcactctccagagtttcaatgctctcttcacaactgaatgaa
atgcgcaatgaagtgaaacggaatcattccagcaacgatttcaaactgttcccatgcggt
cctgaagcccgggaatgggaatacttcagtgggaaatgttacttcttctccttgcgtgag
acatcttggcagagggcgaaggtgctgtgcgaggaggagcattcacgcctggccatcatt
aacagccgcaccaagcagaattttatcatgtacaggacacgcaaccagcgcttctggatc
ggcctctcagaccagaactcagaaggggagtggaaatggatcgacgggagcgactccaca
actggtttcacgtactggaaggagggggagcccaacaacagtggccagaatgaggactgt
gcgcacgtctggacctacggggagtggaacgacgtgcattgcacatacgagtgctactac
atctgtgaaaagcctgcacctccatga

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