Trachemys scripta elegans (red-eared slider): 117888717
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Entry
117888717 CDS
T07347
Symbol
NUP210L
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117888717 (NUP210L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117888717 (NUP210L)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117888717 (NUP210L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_15th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_9th
Ig_NUP210_4th
Ig_NUP210_6th
NUP210_Ig
Big_2
Motif
Other DBs
NCBI-GeneID:
117888717
NCBI-ProteinID:
XP_034648253
LinkDB
All DBs
Position
16:10054276..10097747
Genome browser
AA seq
1876 aa
AA seq
DB search
MRLPRRGRPPPLLLPLPFLLLLGPALPFKLNVPKVLLPFSRELHVPFVLEAEGGCYSWYS
TRHDTITIEPIYENGTTCSQKALLSTQSTQATKLSSVVIAEELVTGHLLRCDIIVDMINS
IEIISRTREIYVEDSPLELTVRALDVEGNTFSSLSGMTFEWSIAKDDDMEGLELSSKIRI
LKYSEAEYSPPDYIVEMERAGKQGDRILVSGIKTGAAVIKVRIQEPTYKKVAAALVRLLV
LENIFLIPSYDIYLLVGAYIQYHVAKIVQGKITEVDLPLEHYELELRDPTVAPGGSDLIP
VARLDVDTATVTAMQLGQISLVFVHKNIHMRAASGLPNCTVYVVEAGFLGFSVHPGDRWV
LEVKRAYTITVEVYDKSSTKVYLSDNLRITHQFPKEYFEEFLSSVNGSYHIVQVLKEGIT
VIKAALVSVLLQAGSEDYLPVPISHEQEVKIYFPIKLTPSFLAFPHHPMEILYRYKVQVE
GGSGNFTWTSSNQTVVTVTIKGIVTAGVVRGQSTVQARDVQNPFHYGEVKVCVLKLTKME
ILPFHADIEIGQVLEVPLMMYHTDRETRETIAFTDCSLLALDVSMDKQGVFILAEEGNQK
PGLTFCSSIQLAAKSLGHTLVTVSVTVFQEYFETSATFAAYEPLKALNPVEVALVTWQSA
KQMVFDGGPGPWVLEPSRFFLELTVEHEEKIEITQVRLPTKRKQNQYVYRILCLELGEQV
LTLRVGNQPGVLNPSPAVETVQVTFICAHPASMSVTPVYKVAAGAQPCPLPQHNKQLIPV
SSLRNTVLELAVFDQHRRKFDNFSSLVLEWKSANESLAHFTDSKSMQMVAKDDGSGQTRL
HGHQLLEVHRIKGTILIGVSFVKYSERGSPREVSNLPTSTTVELLLVEDVTVVPDNATIY
NHPAVKEIFDLVEGSGYFLVNSSKEEIVNTTYLEAESAIEIIPLHPGSLTLEVYDLCLAF
LGPATVYIHVSDMHELEVDLIDKIEIGKSVLVSVRVLGFHRHPFRSKYFKYMKLKLQAAS
AIVTLMLMEEVGEYSEVYVLRAVAIGQTTLVATAWDKMGRKFTSAPRKVEVFPPFKLLPE
EMTLIPHNMRQVMSEGGPQPQSIIHFSISNQTVAVVNRLGQVMAKAVGTAIIQGTIQAVS
EDTGKVIVFSKDQVELEVVQLRAVRIHAPATRLITATKMPVYVMGLTSTLTPFSFGNANP
GLIFHWSMSKRDVLDLLPRHSEVSLQVVPENNFAMVVHTKAAGRTSIKVTVQCLNVSAGQ
FEGNMAELSDEVQILVFDKLLLFSPECPAEQILMSTNSQLKLYTNRDGAVLVSSQILQCF
PNSSVIEEHGQGLLRAGTVTGTAVLEVTSLELFGVNQTVITGVRVAPVSYLRISTSPQLY
TISSTSLMAFPLGMALTLTVQFYDNIGEKFHAQNTQLYLALNRDDLLLIRPGNKNYTYIA
QAVNRGVTLLGIWDEKHPGMADYIHMPVEHVIEPDLSKPIAVGDVICFSTPLVNQEGEPG
LWQVSPTGILETDPLSGAAFVKNAGTATIFHDIPGIVKTYREVVVNGSSRLSLHLGPKSY
LTNTPNSSEVWVFVATGRAGTSLRGPCSPSQVYAITNLLRPESHLLCQVEFSSTVLDIPA
SKVFHVRSHFSIEKGLYACIITAKPQSDEVLLALSFAEVSVDVMVCLFSEQSKDGMQRIL
VPFLPAFYLNQSELVFSSKQLNGKIRVLGAEKVLEKLEVHPNSPVIIVRQPEHSPNMPGL
VSYPVSVVNLTSLHQMAAPIFINVSCILTGQRVTITVRVLAGQPLFSPCSEAGIVQQLMG
SYQILLFTLFAVLAATAVIFLTYNAFLTRVQTVPIVYVPISATPQTGYSYPPAGTQQHNG
RNRTQLWLWSVRRRHV
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgccgaggcggggccggccccccccgctcctcctccccctccccttcctgctc
ctcctgggccccgccctccccttcaagctcaacgtgcccaaggtgctgctgcccttcagc
cgagagctccacgtccccttcgtgttggaggccgagggcggctgctactcctggtattcc
acacgtcatgacacaatcaccattgagccaatttacgagaatggtaccacttgttcgcag
aaagctttgctgtctactcaatctacacaggccacaaagctaagcagtgttgttatagct
gaggagcttgtgacaggccatttactgcgttgtgacatcattgtcgatatgataaacagt
attgaaattatctcccgaacccgagaaatatatgtggaagattctccacttgaattaacc
gtgagagctctggatgttgaaggaaacacattcagtagtttgtcaggaatgacatttgag
tggagcattgctaaggacgatgacatggaaggcttagaactgtctagcaaaattaggatt
ttaaaatactctgaagcagagtattccccaccagactacattgtcgagatggaacgagca
ggaaaacaaggggataggattctggtatcaggcatcaaaactggtgcagctgtcataaag
gtccgaattcaggaaccaacttataagaaagtagctgctgcactggtgcgtctgttggtt
ctggagaatatattcctaataccatcctatgacatttaccttctggttggagcctacatt
cagtaccacgttgctaaaattgtacaaggaaagatcacagaagtagatttgcctcttgaa
cattatgagcttgaactacgtgaccccactgttgcacctggtgggtctgatcttattccg
gtggccagactggatgtggacacagccactgtgacagcaatgcagttgggacagattagt
ctggtctttgttcataaaaatattcacatgcgagctgcatctggacttccaaactgcact
gtctatgtcgtagaagctggatttctaggtttcagtgttcacccaggagacaggtgggtt
ctagaagtgaagcgagcatatacaatcactgttgaggtgtatgataaatccagcactaaa
gtctatttatctgataacctcagaataactcaccagtttcccaaggagtattttgaagag
ttcttgtcttcggttaatggttcttaccatatagttcaagtcctgaaggagggcatcaca
gtaataaaagctgccctggtatctgttcttctacaggctggctctgaggattacttacct
gtcccaatcagccatgaacaggaggtgaagatttactttccaatcaagttgacaccctcc
ttccttgcatttccacaccatcccatggaaatcttgtatcggtacaaagttcaggtagaa
ggaggcagtggcaatttcacgtggacctcttccaatcagactgtagtcacagtcaccata
aaaggaatagtgactgccggggtggtcagagggcagagcacagtacaggccagagatgtg
cagaaccccttccattacggagaagtaaaggtgtgtgtcttgaaattgacgaagatggag
attttgccatttcatgcagacattgagattggccaagttttggaagttccactcatgatg
taccacaccgatagggagacaagggagaccattgcttttacggactgctccctcttagcc
ctggacgtaagcatggataagcaaggagtcttcatccttgctgaagagggtaatcagaaa
cctggcctgacattctgctccagtatccagttagcagcaaagtccttgggacacacgttg
gtaacggtgagcgtgaccgtgttccaggagtattttgaaaccagtgccacatttgctgct
tatgagcctctcaaggctctaaacccagtggaggtggcgttggtgacttggcagtcagcg
aagcagatggtatttgatggagggccggggccatgggttttggaaccatctcgtttcttc
ttggaattgactgtggagcatgaggaaaaaattgaaattacacaggtccgactgccaact
aaaaggaaacagaaccagtacgtttaccggattttgtgcttggagttgggggagcaggta
cttacgctccgagtaggtaatcagccaggagtcctgaaccctagtcctgccgtggaaact
gtgcaggtgactttcatttgtgctcatccagccagtatgtctgtgaccccagtgtacaag
gtagctgcaggtgcccagccttgcccgttgcctcagcacaacaaacagctgatccccgtg
tccagtttgaggaatacagttttggagttggccgtgtttgatcagcaccggcggaagttt
gacaactttagctccctggtgctggagtggaaatcagccaatgaaagtctcgcacacttt
actgactcaaagtccatgcagatggtagcaaaggatgatgggagtggacagaccagattg
cacgggcatcagctcctggaggtgcaccgcatcaaagggactattctgattggagtcagc
tttgtgaagtattcagaaagaggcagtccaagagaagtatctaacttgcctacctccacg
actgtggagttgttactggtagaggatgtgacagtggtgccagacaatgccactatctat
aatcatcctgctgtgaaggaaatatttgatctagtggaaggatctgggtacttcttggtc
aacagcagcaaagaggagattgtaaacactacatacctagaagcagagagtgccatcgag
atcatccctttgcatcctggatctctaaccctggaggtctacgatctctgtctggcattt
ctgggaccagctacagtctatatacatgtgtctgatatgcacgagttggaggtggatctc
attgacaagatcgagattggcaaatctgtcctagtcagcgtgcgagtcctcggttttcat
cgacatccattcaggagtaaatatttcaagtacatgaagctcaaactacaggcagcatct
gctattgttacacttatgctgatggaggaagtgggtgaatactctgaagtctatgtactc
cgagctgtcgcaataggacagacaactttggtggctacagcctgggacaagatgggaaga
aaattcacttctgctcctcggaaggttgaagtctttcctccgttcaaactcctcccagag
gaaatgaccctcattccacacaacatgaggcaggtgatgtcagaaggtggcccacagcca
cagtccatcattcacttctctatcagtaaccagactgtggctgtagttaacaggctgggc
caggtgatggctaaggcagttggaacagccataatacagggtaccattcaggcggtcagt
gaagacacaggaaaagtaatagttttctcaaaggatcaagtggaattggaagtagttcag
ctgagagcagtaagaattcatgcacctgccactaggcttataacagccaccaagatgcct
gtttatgtcatggggctgaccagcactctgactccattttcctttggtaatgccaaccca
gggctgatattccattggtcaatgagtaaacgggatgttctggaccttctcccccgacac
tcagaggtttccctgcaggttgtacctgagaataactttgctatggttgtacatactaag
gcggctgggagaaccagtattaaagtgacagtgcaatgtctgaatgtatccgctggtcag
tttgaaggaaacatggctgaactttcagatgaagtacaaatattggtgttcgataagctt
ctacttttctctcctgagtgccctgcagagcagattctgatgtccacaaactctcagctc
aagctgtatacaaacagggatggggcagtgcttgtgagctctcaaatcctgcagtgtttc
cccaactcttctgtcattgaggagcatggccagggactcctgagagcaggaactgtgaca
ggcactgcagtgctagaagtaacttctctagaactctttggagtcaaccagacagtcata
actggggtccgggtggctccagtgtcatacctgaggataagtaccagtccccagctctac
accattagcagcacatctctgatggcatttcctctggggatggctcttactctcacagtc
cagttctatgacaatattggggaaaaattccatgcccagaacacccagctttacctggct
ttgaacagagatgacctgctgctaatcagacctgggaataagaattacacctacatcgct
caagctgtgaacagaggagtgacgctgttgggaatctgggatgagaagcacccaggcatg
gctgattatatccacatgcctgtggagcatgtcattgagccagacctctcaaagcccatt
gcagtaggagatgtgatctgtttcagcaccccccttgtaaaccaagaaggtgaacctggg
ctgtggcaagtctcccccacgggcattcttgagacagaccctttgagtggagcagcattt
gtgaagaatgctgggacagctacaatcttccatgacatcccagggatagtgaaaacatac
cgagaggtagttgtcaatgggtcatcaagattaagcctccaccttggtcccaaaagctac
ctaaccaatactcctaactcttctgaagtctgggttttcgttgccacaggcagggcagga
acaagcctcagaggcccatgcagccctagtcaggtttatgcaatcactaatctgcttcgc
ccagagtctcacctgctatgtcaagttgagttcagcagcactgtgctggatattccagca
agtaaagtctttcatgtccggtcacacttcagtattgaaaaaggtctctatgcctgcata
atcactgctaaaccccagtctgatgaagtcctgctggctttgagttttgctgaggtctct
gtagatgtgatggtctgtctcttcagtgaacaaagcaaggatggaatgcaaagaatcctg
gttcccttcctccccgcattttacctcaaccagtctgaattggtttttagcagcaaacaa
ctaaatggcaagatcagagtgctgggagctgagaaagtgttagaaaagctggaggtccac
cccaactctcctgtgataatagtgaggcagcctgaacattcacccaacatgcctggactt
gtctcctacccagttagtgtggtcaatctcacatctctccaccagatggcagcccccatc
tttatcaatgtctcttgtattctcacaggccaaagagttaccataactgtgagagttctg
gcagggcagcctctgtttagtccgtgcagtgaagcaggaattgtccaacagcttatgggc
tcttaccagatccttctcttcaccctctttgctgttctagcagcgacagctgtaatcttt
ctcacatacaatgcctttctgaccagagtacagactgtacctattgtgtatgttcctatc
tcagctacacctcagacagggtattcatatcctcctgctggtactcaacaacacaatgga
agaaacaggacacagctatggctttggagcgtacggagaaggcatgtttga
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integrated database retrieval system
