Thiomicrolovo subterrani: WCX49_08150
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Entry
WCX49_08150 CDS
T11234
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub01501
beta-Lactam resistance
tsub01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WCX49_08150
01503 Cationic antimicrobial peptide (CAMP) resistance
WCX49_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsub03036
]
WCX49_08150
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsub02000
]
WCX49_08150
01504 Antimicrobial resistance genes [BR:
tsub01504
]
WCX49_08150
Chromosome and associated proteins [BR:
tsub03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
WCX49_08150
Transporters [BR:
tsub02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
WCX49_08150
Antimicrobial resistance genes [BR:
tsub01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
WCX49_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
XAU01889
LinkDB
All DBs
Position
1563539..1564663
Genome browser
AA seq
374 aa
AA seq
DB search
MKRHPYAPLVFAASLLFGNSLLAESAAPANPAPHADAYVVKALATSDVVLSYPARLKSIR
SATVVSRVTGVLLEKRFKEGDYVKKGTRLYQIEPDLYQAAVNEQKASVILQEALYTKAER
DWARAQSLYKDNAISVQEHDAALSAFETARAQVNAAKAQLQTRELELGYTDVTAPISGIA
GIKQTDVGNVVNAGTPLVTITQTDPIYALFSIPSGDLQKARVSNKEGRWSWAKTGNLKAT
LDVDGIKVSGEIDYIAPDADTQTGSVSARARFKNSDNLLLPGAFGRITIEGIRRENVIMI
PQKAVLQNPMGTIVFVEQEGQAAVRPVVLGDPVGNSFVVRKGLAEGDKVIVNNFFRVKPG
APVIIDKTVDAEGK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgacacccctacgccccgctcgttttcgcggcatcactgctgttcggaaacagc
cttttggccgaatcggcagctcccgctaacccggcaccgcacgccgatgcctatgtcgtc
aaggcactcgcgaccagcgacgtcgtcctgagctaccctgcccggctcaagagcatccgc
agtgccaccgtcgtctcccgtgtgacgggcgtactactggagaagcgcttcaaagagggc
gactacgtcaagaaaggcacccgcctctaccagatcgaacctgacctttaccaggcggcg
gtcaacgagcagaaagcctccgtcatcctccaggaggcgctctatacgaaagccgaacgc
gactgggcacgggcacagtccctctacaaggacaacgccatcagcgtccaggagcacgat
gccgcgctctcggcctttgaaacggcacgcgcgcaggtgaacgcggcaaaggcgcagctg
cagaccagggagctggagctgggctataccgacgtcaccgcccccatcagcgggatcgcc
ggcatcaagcagaccgacgtcggtaacgtcgtcaacgccggaacgccgctcgtgaccatc
acccagaccgacccgatttacgccctcttttccatcccttcgggtgacctgcaaaaagca
cgtgtttccaacaaagaggggcgctggagctgggccaaaacgggcaatctcaaggcgacg
ctggacgtcgacggcatcaaggtgagcggcgagatcgactatatcgctccggacgcggat
acgcagacgggcagcgtcagcgcccgggcacgtttcaaaaacagcgacaacctcctgctg
ccgggtgccttcgggcgcatcacgatcgagggtatccgccgcgaaaacgtcatcatgatc
ccgcagaaggccgttttgcagaacccgatgggcaccatcgtctttgttgagcaggagggg
caggccgccgtccgtcccgtcgttctcggcgaccccgtcggcaacagtttcgtcgtacgc
aaagggcttgccgaaggggataaggtcatcgtgaacaacttcttccgtgtcaaacccggc
gcccctgtcatcatcgacaaaaccgtcgatgcggaaggcaaataa
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