Thiomicrolovo subterrani: WCX49_12200
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Entry
WCX49_12200 CDS
T11234
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub00300
Lysine biosynthesis
tsub00550
Peptidoglycan biosynthesis
tsub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCX49_12200
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
WCX49_12200
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsub01011
]
WCX49_12200
Enzymes [BR:
tsub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
WCX49_12200
Peptidoglycan biosynthesis and degradation proteins [BR:
tsub01011
]
Precursor biosynthesis
Amino acid ligase
WCX49_12200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
DapB_N
FAS1_DH_region
CdiA_C
Motif
Other DBs
NCBI-ProteinID:
XAU02655
LinkDB
All DBs
Position
complement(2366077..2367372)
Genome browser
AA seq
431 aa
AA seq
DB search
MKIALPDQPFRFVTENSAECDAETAFVLTGLNRRYLDDAKARGVHSVISPADVASLFGLD
RIKVIGITGTNGKTTTASAIYSILLDLGHKAAMQGTRGFFMNDAVVEGKSLTTPTLLETY
RHIYQAVAAGCEYFVMEVSSHAIVQARAEGIEFALKILTNITQDHLDYHETLEEYIRVKN
SFFADEGKKLINKDEAKADFNIKNAFTYGAENPATYKVVAYSLNEGISAVVQHFGKVHTF
HSPMHGFFNVYNLTAAVAAVQLVTGDDLEAVCDAVSGFAGVSGRMEVVSESPLVIVDFAH
TPDGMAQVLNALKEKEMLVVFGAGGDRDRSKRPLMGRVAENLAKKVFITSDNPRSEDPDA
IIADILGGMTHPEKAVVEPNRRAAIAKALETRSGDEVVVVLGKGDEQYQIIYDKQFPFDD
REVIRSLLSEV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatagcgcttcctgatcaaccgttccgttttgtaacggaaaactccgcggagtgc
gacgctgagacggcgttcgttctcaccggactgaaccgccgctacctggacgatgccaag
gcgcgcggcgtccactccgttatctcccccgccgacgtcgcttccctcttcggtcttgac
cgtatcaaggtgatcgggattaccggtaccaacggcaagacgacgacggcgagcgccatc
tactccatcctgctcgatctcggccataaggcagcgatgcaggggacccgcggctttttc
atgaacgatgccgtcgtggaggggaaaagcctcacgacgccgacgctgctggagacctac
cgccatatctaccaggcggtcgccgcggggtgcgaatacttcgtcatggaggtgagctcc
cacgccatcgtccaggcgcgggcagaggggatcgaatttgcgctgaagatcctcaccaac
atcacccaggaccacctcgattaccatgagacgctcgaggagtacatccgtgtcaagaac
agcttttttgccgacgaagggaagaaactgatcaacaaggacgaggcaaaggcggatttc
aacatcaaaaacgcctttacctacggggcagagaacccggcgacctacaaggtggtggcc
tattcgctcaacgaagggatcagcgccgtcgtgcagcacttcgggaaggttcacaccttc
cacagcccgatgcacggttttttcaacgtctataacctgaccgcagccgtcgcagcggtg
cagctcgtcaccggcgatgacctcgaagcggtctgtgacgccgtcagcggattcgcgggt
gtgagcgggcggatggaagtggtcagcgaatctccgctcgtcatcgtcgattttgcccac
acccccgacgggatggcgcaggtgctcaacgccctcaaggagaaggagatgctggtcgtc
ttcggcgcaggcggcgaccgcgaccgctccaaacgccccctgatgggccgggtggcggag
aaccttgccaagaaggtctttatcaccagcgacaacccgcgcagcgaagaccccgatgcg
atcatcgcggatatcctcggcgggatgacccacccggagaaggccgtggtcgaacccaac
cgcagagcggcgatcgccaaggcgctcgaaacgcgcagcggggacgaagtcgtcgtcgtc
ctcggaaaaggggacgagcagtaccagatcatctacgacaagcagtttcctttcgacgac
cgtgaggtcattcgttcactgttaagtgaggtttga
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