Thiomicrolovo sulfuroxydans: LOH54_07405
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Entry
LOH54_07405 CDS
T11233
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LOH54_07405 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsul03400
]
LOH54_07405 (nth)
Enzymes [BR:
tsul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LOH54_07405 (nth)
DNA repair and recombination proteins [BR:
tsul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LOH54_07405 (nth)
Prokaryotic type
LOH54_07405 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Tsi1
Ogg-HhH
DUF2400
MRFAP1
Motif
Other DBs
NCBI-ProteinID:
UFS61488
LinkDB
All DBs
Position
1458660..1459316
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AA seq
218 aa
AA seq
DB search
MKKVKKATKVEIEAIKAALMERYSEAVTELDYRNAYELVIAVALSAQCTDKRVNLITPAL
FEKYPDPAALAAADVDDVKAIIRSCSFFNNKAVNIVKMAQRVMEVYGGEIPMNEKDLVTL
AGVGQKTAHVVMIEYTGANLMAVDTHVFRVAHRLGLSDDETALKTEETLVKKFKTDLHAL
HQGMVLFGRYICTAKNPKCETECFLQEYCKSTEGFKAR
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtgaaaaaagccaccaaagtagagatcgaagccattaaggcggccctgatg
gagcgctacagcgaggccgttacggagctggactaccgcaacgcctacgaactcgttatc
gccgtcgccctctcggcgcagtgcacggacaagcgggtcaacctgatcacccccgcgctt
ttcgaaaagtaccccgaccccgcagccttggctgccgccgatgtcgacgacgtgaaagcg
atcatccgcagctgttccttctttaacaacaaagccgtcaatatcgtgaaaatggcgcag
cgggtcatggaggtctacgggggcgagatcccgatgaacgaaaaggatcttgtcaccctc
gcgggcgtcgggcagaagacggcccacgtcgtcatgatcgagtacacgggggcaaatctg
atggccgtcgacacccacgtcttccgcgtcgcccaccgcctggggctcagcgacgacgaa
acggcgctgaaaaccgaagagaccctggtcaagaagttcaagacggacctgcacgccctg
caccaggggatggtcctgttcggccgctacatctgcacggcaaaaaaccccaaatgcgag
acggagtgtttcttgcaggagtactgcaaaagtaccgaagggttcaaagcccgctga
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