Thiomicrolovo sulfuroxydans: LOH54_08070
Help
Entry
LOH54_08070 CDS
T11233
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tsul Thiomicrolovo sulfuroxydans
Pathway
tsul01501
beta-Lactam resistance
tsul01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOH54_08070
01503 Cationic antimicrobial peptide (CAMP) resistance
LOH54_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsul03036
]
LOH54_08070
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsul02000
]
LOH54_08070
01504 Antimicrobial resistance genes [BR:
tsul01504
]
LOH54_08070
Chromosome and associated proteins [BR:
tsul03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LOH54_08070
Transporters [BR:
tsul02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LOH54_08070
Antimicrobial resistance genes [BR:
tsul01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOH54_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
YknX_C
RND-MFP_C
HH_EMRA
HH_MFP_RND
CzcB_C
Beta-barrel_RND_2
BSH_CzcB
HH_YBHG
BSH_CusB
BSH_YknX
HH_AAEA_pHBA
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
UFS61618
LinkDB
All DBs
Position
1573038..1574162
Genome browser
AA seq
374 aa
AA seq
DB search
MKRPPYAPLVFAASLLFGSSLVAETAAPAAPAPHADAYVVKAVAKRDVVLNYPARLKSIR
SATVVSRVTGVLLEKRFKEGDYVKKGTRLYKIEPDLYQAAVNEQKASVILQESLYTKAER
DWKRAQALYKDNAISVQEHDAALSAYETARAQVNASKAQLQTRELELGYTDVTAPISGIA
GIKQTDVGNVVNAGTPLVTITQTDPIYALFSIPSGDLQKARVENKEGRWSWGNEGRLKAS
LDVDGIKVSGDIDFIAPTADTQTGSISVRARFKNSDNLLLPGTFGRVTLEGISRDNVIMI
PQKAVLQNPMGTIVFVEQEGQAAVRPVVLGDPVGNSFVVRKGLAEGDKVIVNNFFRVKPG
APVIIDKTVDAEGK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccccccctacgccccgctcgttttcgcagcctcactgctgttcggaagcagc
ctcgtcgccgaaacggcagcccccgccgccccggccccgcacgccgacgcctatgtcgtc
aaagccgtcgcgaaacgcgacgtcgtcctgaactaccccgcccgcctcaaaagcatccgc
agcgcgaccgtcgtctcccgcgtcaccggcgtgctgcttgagaagcgtttcaaagagggc
gactacgtcaaaaaaggcacccgcctctacaaaatcgagcccgacctctaccaggcggcg
gtcaacgaacagaaggcctccgtcatcctgcaggagtcgctttatacgaaagccgagcgt
gactggaaacgggcgcaggccctctacaaggacaacgccatcagcgtccaggagcacgat
gccgcgctctcggcctatgaaacggcccgcgcgcaggtcaatgcctccaaggcgcagctg
cagaccagagagctggagcttggctataccgacgtcacagcccccatcagcgggatcgcc
ggcatcaagcagaccgacgtgggcaacgtcgtcaacgccgggacgccgctggtgacaatc
acccaaacggacccgatttacgccctcttctccatcccttcgggcgatctgcaaaaagcg
cgcgtggagaacaaagaggggcgctggagctgggggaatgaggggcgtctcaaagcctcc
ctcgacgttgacggcatcaaggtaagcggcgacatcgactttatcgcgccgacggcggat
acccagacgggcagcatcagtgtacgcgcacgtttcaaaaacagcgacaacctcctgctg
ccggggactttcggacgcgtgacactggaggggatcagccgcgacaacgtcatcatgatc
ccgcaaaaagcggtcctgcagaacccgatgggcaccatcgtcttcgtcgagcaggagggg
caggcggccgtccgtcccgtcgtcctcggcgaccccgtcggcaacagtttcgtcgtgcgc
aaagggctcgccgaaggtgacaaggtcatcgtgaacaacttcttccgtgtcaagcccggc
gccccggtcattatcgacaaaaccgtcgatgcggaagggaaataa
DBGET
integrated database retrieval system
