Terricaulis silvestris: DSM104635_03597
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Entry
DSM104635_03597 CDS
T06781
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
tsv
Terricaulis silvestris
Pathway
tsv00220
Arginine biosynthesis
tsv00250
Alanine, aspartate and glutamate metabolism
tsv00430
Taurine and hypotaurine metabolism
tsv00910
Nitrogen metabolism
tsv01100
Metabolic pathways
tsv01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tsv00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
DSM104635_03597 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DSM104635_03597 (gdhB)
00220 Arginine biosynthesis
DSM104635_03597 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
DSM104635_03597 (gdhB)
Enzymes [BR:
tsv01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
DSM104635_03597 (gdhB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_HM1
GDH_ACT1
GDH_ACT3
ELFV_dehydrog
GDH_HM2
Motif
Other DBs
NCBI-ProteinID:
QGZ96736
UniProt:
A0A6I6MTF9
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All DBs
Position
complement(3480442..3485316)
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AA seq
1624 aa
AA seq
DB search
MDAAARQELPKTADQFVATVVKGPWPAFKANGAMDAAAEAFLRGLYEDASDDELGDLSVA
DFAAIAHDFWIWRTERQCDEQCVRVRRAVGVNGVQLDRDILEIAGPDMPFLVDSVMGEIS
DQGITTLAMFHPLAPATNGRDRDSLIQIHLPRLSAQRAKALHDGVRGSLADVRASVADFK
AMRQRMLHAAEELETATTNAPPEEVAEAVALLRWLAADKFTFLGSRDYKYTRLADGSYKP
DEPEILSASCLGVLRDLDLYVLRTSAEPMVLTPELKRLVAEPAPLVVAKSTIRARVHRRA
TADYISVKRYNDKGEATGEVRFVGLFTSESFTESTRNIPMLRRKAEWVMDQAAFAPGGHN
AKTLRKIIEYYPREELWQMSREELLRISRGILHLLDRPRARLFTRRDRFNRFVTALVYIP
KDRYDSDIREKVGSLIARAYGGIVESFQPQLGEGQLARVLFVIGEIDKTRPEPNAQQLDA
EVATLTHTWEDTFRAELMRSPLFDAAAREEASNRFDDAFTASYRERYGVDEGITDTIEIL
GASDGEVIRARAYRMESDALNTVRCKFYTRGDVLALSAVVPILENLGLFVDSEINFELNL
KASALHPAQRIYVHDIETRSADGAPIDLVRAGYKFEEAFTAVWTGKAESDGFNRLILALS
CSWREAALVRALARYRQQSGLDPTQSVQEQALANNPKIASLILAFFKARFDPNLPETMET
RQIRSSKLEFMVEAALTEVVSLDEDRALRRIAHLVKAIRRTNYYQPGADGQPKPYMSFKI
DSNAVAELPAPKPYREIWVASPQVEGVHLRFGPVARGGLRWSDRRDDFRTEVLDLVKAQQ
VKNAIIVPVGAKGGFYPKRLPARGAANYQEAGIEAYKTFLRGLLDITDNIVGDSIKAPNN
VVRWDDDDAYLVVAADKGTATFSDIANGISAEYGHWLGDAFASGGSVGYDHKAMGITAKG
AWVAVQRHFREIGKDIQEKEFTVIGVGDMSGDVFGNGMLLSRKIRLLAAFDHRDIFIDPN
PKDCEASWIERKRLFDTPRTSWADYDKKLISKGGGVFSRSLKSIEISTEIAALTGIDKAS
VTPTELMSALLKAQCELMWFGGIGNYIKARAESHGDVGDKANDGVRVDAEDVRAQVVGEG
ANLGVTHKGRIAFARAGGRINTDAIDNSAGVDTSDHEVNIKILLSEVIRSGALKADKRDK
LLESMTDEVGALVLEDNYDQTGAISIAQASAVNDLDSHERFIQRLESEGKLNRRVEGLPL
TGEFASLRAAKLGLTRPELAKLVAYSKINLFDALVASATPDDPAFEEPLKRYFPKELWKF
EAQMKTHRLRREIVATQLADDLVNRCGPSFVDRIKDISRAKTVTVACAFEASRRIFELED
LVDRINALDNKVPAVAQIALHQRVGGALRRATTYLSRTAGFELDTPPSILDVVKLYREPV
AAQRKHLWEEMSAVECARAEARQAALMELGAPEDLALEAGLLLPLTSALDVSDLARRSGW
PVHEAALLHCVVGAEFGIDALRDAASNLKLEQHWDRLVVRRVGEDFGETQLKLAEAAAKA
IGAPPNNADAHGIGEAAKGWITSLGQPALRVRSAYAELNAQPPWTFAKLMLISAELNAFA
AAVR
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccgcgcgccaggaactccctaaaaccgctgaccaattcgtcgctaccgtc
gtcaaagggccatggccggccttcaaggccaatggcgccatggatgccgccgctgaggcc
ttcctgcgtggcctctacgaggacgcctctgacgacgagcttggcgatctctcggtcgca
gacttcgccgccatcgcgcacgatttctggatttggcgcactgagcgccaatgcgacgag
caatgcgtccgggtgcgccgcgctgtcggtgtgaacggcgtccaactcgatcgcgacatc
cttgaaattgccgggccggacatgccgttcctagtcgactcggtgatgggcgaaatctcg
gatcaaggcatcacgacgctggcgatgttccacccgttggcgccagccaccaacggccgc
gaccgtgactcgctgattcagatccatttgccgcgtctgtcggcgcagcgcgccaaggcg
ttgcacgatggcgtgcgcggttcgcttgcagacgtgcgcgcgtcggtggccgatttcaaa
gccatgcgtcagcgcatgctgcacgccgccgaagagctggaaaccgcgacgaccaatgct
cctccggaggaggtggctgaggccgttgcgctgctgcggtggctggccgccgacaagttc
actttcctcggttcgcgcgactacaaatacacgcgcctcgccgacggcagctacaagcca
gacgaaccggagattctgagcgcctcgtgcctcggcgtgctccgcgatctcgatctctac
gtcctgcgcacttcggctgaacccatggtgctgacgccggaattaaagcgcctggtggcg
gaacccgcgccgctcgtcgtcgccaagtccaccatccgcgctcgcgtgcaccggcgcgcc
accgccgattacatcagcgtcaagcgctacaacgacaagggcgaagccaccggcgaagtc
cgtttcgtcgggctgttcaccagcgagtccttcacggaatccacgcgcaacatcccgatg
ctgcgccgcaaagccgagtgggtgatggaccaggccgcgttcgcgccgggcggacacaac
gccaagactctgcgcaagatcatcgagtactacccgcgtgaagagctgtggcagatgtca
cgtgaagaattgctgcgcatctcccgcggcatcctgcatttgctggaccgtccgcgcgcc
cgcttgttcacacgccgcgaccgcttcaaccgcttcgtcaccgcactcgtctacatcccc
aaggatcgctacgattccgacatccgggagaaagtcggctctctgatcgcgcgcgcctat
ggcggtatcgtcgagagtttccagcctcagctcggggaagggcagcttgctcgcgtgctg
tttgtgattggcgagatcgacaagacgcgtcccgagcccaatgcacagcagttggacgcg
gaagtcgcaacgctgacccatacctgggaagacaccttccgcgccgagctcatgcgctcg
ccgctgttcgatgccgctgcgcgcgaagaagcgtccaaccgcttcgacgacgccttcacc
gcgtcctatcgcgaacgctatggcgtcgacgagggcatcaccgacacgatcgagattctc
ggcgccagtgatggcgaagtcatccgcgcccgggcgtatcgaatggaatcagacgcgctg
aacaccgtgcgctgcaaattctacacccgcggcgatgtgttggcgctttccgctgttgtg
ccgattcttgaaaacctaggcttgttcgtcgattccgaaattaatttcgaactcaatctg
aaagccagtgcgctgcatccggcgcaacgtatctacgtgcacgacatcgaaacccgctcc
gccgacggcgcgccgatcgatttggtgcgtgcgggctacaaattcgaggaagcgttcact
gccgtgtggaccggcaaggccgagagcgacggtttcaatcggctgatcttggcgctctcg
tgctcgtggcgcgaagcggcgctcgtgcgcgcattggcgcgctatcgccagcaaagcggc
cttgatccgacccaatcagtgcaagagcaagcgctcgcgaacaatccgaagatcgcgtcg
ctgatcttggcgttcttcaaagcgcgtttcgaccccaacctgccggagacgatggagacg
cggcagatccggtcgagcaagctcgaattcatggtcgaagcggcgctgaccgaagttgtc
agccttgacgaagaccgcgcgctccgccgcatcgcgcacttggtgaaggcgatccggcgc
acgaactattatcagcccggcgccgatggccagccgaagccctacatgtcgttcaagatc
gactccaacgccgtggcggaactgccagcgccgaagccgtaccgcgaaatctgggtggcg
agcccgcaagtcgaaggcgtgcatttgcgctttggcccggtcgcgcgcggcggcttgcgc
tggagcgaccggcgtgacgacttccgcaccgaagtgctcgatctcgtcaaagcgcagcag
gtgaagaacgccatcatcgtgccggtcggcgccaagggcggtttttatccaaagcgcctg
ccagcgcgcggcgcggcgaactaccaggaagctggcatcgaagcctacaagacgttcctg
cgcggtttgctggacatcaccgacaacatcgtcggcgattcaatcaaggcgccgaacaat
gtcgtccgctgggatgatgacgacgcctacctcgtcgtcgccgccgacaaaggcaccgcc
acgttctccgatatcgccaacggcatcagcgccgaatacggccactggctgggcgacgcg
ttcgcgtcgggcggttctgtcggctacgaccacaaagccatgggcatcaccgccaagggc
gcgtgggtagccgtgcagcgtcacttccgcgaaatcggcaaggacatccaggaaaaggaa
ttcaccgtcatcggcgtcggcgatatgtccggcgacgtgttcggcaacggcatgttgctg
tcacgcaagatccgcctgctcgcggcgttcgatcaccgcgacatcttcatcgatcccaat
ccgaaagattgcgaagccagctggatcgagcgcaagcgcttgttcgacaccccgcgcacg
tcgtgggcggattacgacaagaaactcatttccaaaggcggcggggtgttctcgcgcagc
ctgaaatccatcgagatcagcaccgagatcgccgcgttgaccggaatcgacaaagcctcg
gtcacgccgaccgagctgatgtccgctctgctgaaggcgcagtgcgaactgatgtggttc
ggcggcatcggcaattacatcaaggcgcgcgcggaatcgcacggcgatgtcggcgacaag
gccaatgacggcgtccgcgttgacgctgaagacgtgcgcgcgcaagtggtcggggagggc
gccaatctcggcgtcactcacaaaggccgcatcgccttcgcgcgcgccggcgggcgcatc
aacaccgacgccatcgacaacagcgccggcgtcgacacctccgaccacgaggtgaacatc
aagattctgctgtccgaggtcatccgctccggcgctctgaaagccgacaagcgcgataaa
ctgctcgagagcatgaccgacgaagtcggcgcgctggtgctggaggacaattacgatcag
accggcgcgatctcgatcgcgcaggcgagcgccgtcaacgatctcgacagccacgagcgc
ttcattcagcgcctcgaatccgaaggcaaactcaatcggcgggtcgaaggcttaccattg
actggcgagtttgcctcgctccgcgccgcgaagctcggcctcacgcgcccggaactggcc
aagctcgtcgcctattcgaagatcaatctattcgacgcgctggttgcctcggcgacgccg
gacgatccggcgttcgaggagccgctgaaacgctacttcccgaaggaattgtggaagttc
gaagcgcagatgaaaacgcaccggctgcgccgcgaaatcgtggcgacgcaattggccgac
gatttggtcaatcgctgcggaccgtccttcgtcgatcgcatcaaggatatttcccgcgca
aaaaccgtgactgttgcgtgcgccttcgaagcatcccgccgcatcttcgaactcgaagac
ttggtcgaccgcatcaatgcgctggacaacaaggtccctgcggtcgcgcaaatcgcgctg
catcagcgcgtcggcggtgcactgcgccgcgccaccacctacctctcgcgcacggccggc
ttcgaactcgatacgccgcccagcatattggatgttgtgaaactctatcgcgagccggtc
gccgcgcagcgcaagcacctctgggaagagatgagcgccgtcgaatgtgcacgcgctgaa
gcgcggcaggctgcactgatggaattgggggcgccggaagacttggcgctggaggccggt
ctcctgttgccgctgaccagcgcgctcgacgtctcggacctcgcgcgacgcagcggctgg
cccgtccacgaagcggcgctgttgcattgcgtggttggcgctgagttcggtatcgatgcg
ctgcgcgacgcggccagcaatctcaagctggagcagcattgggatcgccttgtcgttcgc
cgcgtcggcgaggatttcggcgaaactcagctcaagctggcggaggccgccgccaaggcg
atcggcgcgccaccgaacaacgccgacgcccacgggatcggggaagcagcaaaaggctgg
atcacgagcctcgggcagccagcgcttcgtgtccgctccgcgtacgctgaactcaacgcg
cagccgccgtggacgttcgcgaagttgatgctgatctcagcggagctcaacgcattcgct
gcggcggtgcgttag
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