Thiobacillus sedimenti: VA613_00705
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Entry
VA613_00705 CDS
T10461
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00300
Lysine biosynthesis
tsw00550
Peptidoglycan biosynthesis
tsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VA613_00705
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VA613_00705
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsw01011
]
VA613_00705
Enzymes [BR:
tsw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
VA613_00705
Peptidoglycan biosynthesis and degradation proteins [BR:
tsw01011
]
Precursor biosynthesis
Amino acid ligase
VA613_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WRS39418
UniProt:
A0ABZ1CJ52
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All DBs
Position
148685..150193
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AA seq
502 aa
AA seq
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MAKTQRTPVAPAHGIHESVPHILERLGVAAAELTSDSRKAMPGTVFAAYPGEARDGRDFI
AQAVAQRADGVLWEADHYQWDPALGVPNAGVVGLRTRIGEIAAHVYGEPSRAMHMVGVTG
TNGKTSVAHWIAQAFTRLGRKTAVIGTVGNGFPPVGDKPGALTPALNTTPDAIELQQRLA
LYRRDGAVACAMEVSSHGLAQGRVNGTRFNVAVLTNLSRDHLDYHGDMERYADTKARLFA
WPGLEWAVLNVDDAFGRQLESETRPARVAGYGFHRGAVVAQSLRLSQAGLTLDVQTDWGR
AEFAVPLLGRFNAANVLAVLTTLLVSGVALDDACQALPHIQPPPGRMQTLGGDAHPLVVV
DYAHTPDALEKVLATLREIVASGRLICVFGCGGNRDRGKRPLMGQAAAQGADEVWVTSDN
PRNEDPRGIIDDILAGVGARADARPHVEPDRARAIFEAIGGARQGDVVLIAGKGHEDYQE
SGGERLPFSDVAVARKALEAWA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacccagcggacacctgtcgcccctgcccacggaatccacgaatcggtgccg
catatcctggaacggctgggcgtggcggcggccgagctgaccagcgacagccgcaaggcc
atgccgggcacggtgttcgcagcctatccgggcgaagcgcgcgacgggcgcgacttcatc
gcccaggcggtagcgcagcgcgccgacggcgtgctgtgggaggccgaccactaccagtgg
gatccggcgctcggcgtgccgaatgccggcgtggtagggctgaggacgcgcatcggcgaa
atcgccgcccacgtctacggcgagccctcgcgcgcgatgcacatggtcggcgtcaccggc
accaacggcaagacctcggtcgcccactggatcgcgcaggccttcacgcggctgggacgc
aagactgcggtgatcggaaccgtcggcaacggtttccccccggtcggcgacaagcccggc
gcgctcacgcctgccctcaacacgacgcccgatgcgatcgaactgcagcagcgcctggcg
ctttaccgccgcgacggcgcggttgcctgcgcgatggaggtctcctcgcacggactggcg
cagggccgcgtcaacggcacccgcttcaacgtggccgtgttgaccaatctgtcgcgcgat
catctcgactatcacggcgacatggagcgctacgccgacacgaaggcgcgcctgttcgcg
tggcccggcctggaatgggccgttctgaacgtcgacgacgcgttcggccgccagctcgaa
agcgagacgcggccggcgcgggttgcgggctacggattccatcgcggcgccgtggtcgcg
cagtccctgcgcctgtcgcaggcggggctgacgctcgacgtgcagacggactgggggcgc
gcggaattcgcggtgcccctgctcggacgcttcaatgccgccaatgtgctggcggtcctg
acgacgctgctggtatccggcgtggcgctggacgatgcctgccaggcccttccgcatatc
cagccgccgccgggccgcatgcagacactcggcggcgacgcccatccgctcgtcgtggtg
gactatgcgcatacgcccgacgccctggaaaaggtgcttgcgaccctgcgcgaaatcgtc
gccagcggacgcctgatctgcgtgttcggctgcggcggcaatcgggaccgcggcaagcgt
cccctgatggggcaggcggccgcccagggcgccgacgaagtctgggtcaccagcgacaac
ccgcgcaacgaagatccgcgcgggatcatcgacgacattctcgccggcgtcggcgcccga
gcggacgccaggcctcacgtcgagccggaccgcgcgcgtgccatcttcgaggccatcggc
ggcgcccgccagggtgacgtcgtgctgatcgccggcaaggggcacgaggactaccaggag
agcggcggcgagcggctgccgttctccgacgtcgcggtcgcgcgcaaggcactggaggcc
tgggcatga
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