Thiobacillus sedimenti: VA613_00770
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Entry
VA613_00770 CDS
T10461
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00540
Lipopolysaccharide biosynthesis
tsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VA613_00770 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tsw01005
]
VA613_00770 (lpxC)
Enzymes [BR:
tsw01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VA613_00770 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
tsw01005
]
Lipid A
VA613_00770 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WRS39431
LinkDB
All DBs
Position
163388..164302
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AA seq
304 aa
AA seq
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MIKQRTLKTPVKATGVGLHSGVKVEMTLRPAGPDTGIVFRRMDLDPPAELKADPYLVTDT
RLCSMLESGPAKVSTVEHLMSALAGLGIDNLLVDLTGPEIPIMDGSSAPFVFLLQSAGIV
EQDAAKRYVRITHPIEVRDGDKWARFVPHNGFKVEFTIDFKHPVFEKSGKTVSIDFADTA
YTKEVARARTFGFMHEVEYLRNQGLALGGSLDNAIVMDEYRVLNQDGLRYDDEFVKHKVL
DAIGDLYLLGYPIIGAFQAYKSGHALNNVLLRELLQHRESWEFVSFEHEEDVPPAFVRLH
PLAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagcaacgcactctcaagacgcccgtcaaggcgacgggcgtcggcctgcattcc
ggcgtcaaggtcgagatgaccctgcgcccggcaggtcccgataccggcatcgtgtttcgg
cgcatggatctcgatccgcccgccgagctcaaggccgatccctatctcgtcaccgacacg
cggttgtgctcgatgctggagtcgggccccgccaaggtgtcgaccgtcgagcacctgatg
tccgcgctcgcgggcctcggcatcgacaacctgctggtcgacctcaccggccccgagatc
ccgatcatggacggctcctcggcgccgttcgtgttcctgctgcagtccgccggcatcgtc
gagcaggacgcggcgaagcgctacgtgcgcatcacccacccgatcgaagtccgcgacggc
gacaagtgggcgcgcttcgtgccgcacaacggcttcaaggtcgagttcacgatcgacttc
aagcatccggtcttcgagaagagcggcaagacggtcagcatcgacttcgccgacaccgcc
tacacgaaggaggtcgctcgcgcccgcaccttcggcttcatgcacgaggtcgagtacctg
cgcaaccagggcctcgcgctcggcggctcgctcgacaacgccatcgtgatggacgagtac
cgcgtgctcaaccaggacggcctgcgctacgacgacgagttcgtcaagcacaaggtactc
gacgccatcggcgacctctacctcctcggctacccgatcatcggcgccttccaggcctac
aagtcgggccacgcgctcaacaacgtcctgctgcgcgaactgctgcagcatcgggagtca
tgggaattcgtcagcttcgaacacgaagaggacgttccgcccgctttcgtccgcctgcat
cccctcgcggcatga
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