KEGG   Thiobacillus sedimenti: VA613_02680
Entry
VA613_02680       CDS       T10461                                 
Name
(GenBank) chorismate lyase
  KO
K03181  chorismate lyase [EC:4.1.3.40]
Organism
tsw  Thiobacillus sedimenti
Pathway
tsw00130  Ubiquinone and other terpenoid-quinone biosynthesis
tsw01100  Metabolic pathways
tsw01110  Biosynthesis of secondary metabolites
tsw01240  Biosynthesis of cofactors
Module
tsw_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
tsw_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:tsw00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    VA613_02680
Enzymes [BR:tsw01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.3  Oxo-acid-lyases
    4.1.3.40  chorismate lyase
     VA613_02680
SSDB
Motif
Pfam: Chor_lyase Rv2949c-like
Other DBs
NCBI-ProteinID: WRS39789
LinkDB
Position
complement(545560..546123)
AA seq 187 aa
MSPPRRASLLQAGLQHGWLAHPFRAPRALRGWLSDRGSLTRRLKARYAGFRVDPVARGLA
PPFPDEARPLHLAPRRYAYIRDVLLVGDGQPRVFAHSVLPRASLRGRWCGITRLGTRPLG
EALFADPRIRRLGLTMRRLDARHPLYRAARRHTGVTAPALWGRRSVFCLNGQPLLVTEVF
LPALDTP
NT seq 564 nt   +upstreamnt  +downstreamnt
gtgagccctccccggcgcgcctctctcctgcaggccggcctgcagcatggctggctggcc
catccttttcgtgcgccgcgcgcgctgcgcggctggctgtcggatcgcggctcgctgacc
cgccggctgaaggcgcgctacgccggttttcgcgtcgaccccgtcgcgcgcggcctggcg
ccgccctttcccgatgaagcccggccgctgcacctggcgccgcggagatatgcctacatc
cgcgatgtcctgctggtgggcgacgggcagccgcgggtgttcgcgcacagcgtgttgccc
cgcgccagcctgcgcggccgctggtgcgggatcacgcggctgggcacacgcccgctcggc
gaggccctgttcgccgacccgcgcatccgccgtctgggactgaccatgcgccgcctcgac
gcgcggcacccgctctatcgcgctgcccggcgccacaccggcgtcaccgcaccggcactg
tggggacgccgctcggtgttctgcctgaacggccagccgctgctggtgaccgaagtcttc
ctccccgccctcgacacgccatga

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