Thiobacillus sedimenti: VA613_12390
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Entry
VA613_12390 CDS
T10461
Name
(GenBank) glycoside hydrolase family 15 protein
KO
K01178
glucoamylase [EC:
3.2.1.3
]
Organism
tsw Thiobacillus sedimenti
Pathway
tsw00500
Starch and sucrose metabolism
tsw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
VA613_12390
Enzymes [BR:
tsw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.3 glucan 1,4-alpha-glucosidase
VA613_12390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucodextran_N
Glyco_hydro_15
DUF5336
Motif
Other DBs
NCBI-ProteinID:
WRS38792
LinkDB
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Position
complement(2479614..2481983)
Genome browser
AA seq
789 aa
AA seq
DB search
MPSLPSPLRPLSAAGHAPGAPGIAPSWTASDKDLVGTALGSSRLWFTLGHGIVNEVYHPR
IDIPQVRDLGFIVADDEGFWVEVKRHGDYELSLPAPGVPLPTVVHRHPRFTLTLRLCPDP
ARDALLIDLELEASPDLRVYVLLAPHIGGTGWRNQAAAATHQGRGVLWARQGPFGLALAG
ATPEGGDALGAASAGYVGVSDGWQDFAANGRMTWQYAEAGPGNVALMAEVARRATLALGL
ATSKHAAATLAGSALLQPFEQTFSQQRAAWAGWLQACRPARDLGLPEELGPQYAHSAQVL
KTHSDKTFLGAMVASLSVPWGDQGEERGGYHLVWPRDLVESAQALLVLGCAGEARAVSGY
LMATQHADGHWNQNQWLGGKPYWAGIQLDETAFPVLLASSLAARDALGGMRVADSVRRAL
AFLILNGPASPQDRWEEDAGVNPFTMAVCIAALVAGAALLPEPERALPLAVADFWNARLE
DWCVVRDTELGARHGAPAYYIREAPTAILCDDRAMQRALPINNHSYDLALPASEQVATDF
LQLVRLGLRRADDRLVCDSLKLVDALLKTDTPYGPVWHRYNGDGYGEHQDGRPFDGAGRG
RGWPLLTGERGHYELAAGRDPLPYLRAMAAMARRGLIPEQVWDDRPRAGFRPGEPTGGAM
PLAWAHAEFIKLAASRAAGRPIDRLETVWARYRGVRPEAAWTIWTRGAPLTRRQPGTGVW
IILPEPAMVHVGFDGWHAVADEPTLAHGAALHGVQLDAARLAGCRRLDFTWRALRSGQWH
DGVASIELV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgccatcactccccagcccccttcgccccttgtcggctgccggccacgcgcccggcgca
cccggcattgcgccgagctggaccgcgtccgacaaggatctggtcggcacggcgctggga
tcgtcgcggctgtggttcaccctcggccacgggatcgtcaacgaggtctaccacccgcgc
atcgatatcccgcaggtgcgcgacctcggcttcatcgtcgccgacgatgagggcttctgg
gtcgaggtcaagcgccacggcgactatgaactgagccttcccgcgccgggcgtcccgctg
ccgaccgtcgtccaccgtcacccgcgcttcacgctcaccctgcgcctgtgccccgacccc
gcgcgggatgcgctgctgatcgaccttgaactcgaggcctctccagacctgcgcgtctac
gtcctgcttgcgccgcacatcggtggcaccggctggcgcaaccaggcggcggcggcgacg
catcagggccgcggcgtcctgtgggcgcgccagggcccgttcggtctggcgctggccggc
gcgacgccggagggcggcgatgccctgggcgcggcctcggccggttatgtcggcgtttcc
gacggctggcaggacttcgcggccaacggtcgcatgacctggcagtatgccgaagcgggt
cccggcaacgtggcgctgatggccgaggtggcccggcgggcgacgctggcgctgggcctc
gcgacgtcgaagcacgcggccgcgacgctggccggatcggcgctgctgcaacccttcgag
cagaccttcagccagcaacgggcggcctgggcgggctggctgcaggcctgccgcccggcc
cgcgatctcggcttgccggaggaactcggtccccagtacgcgcattcggcgcaggtgctc
aagacgcacagcgacaagacctttctcggcgcgatggtggcgagcctgtcggtgccctgg
ggcgaccagggcgaggagcgcggcggctaccatctggtctggccgcgcgatctggtcgaa
tcggcgcaggccctgctggtgctggggtgcgccggcgaagcgcgggcggtgtcgggctac
ctgatggcgacgcagcacgccgacggccactggaaccagaaccagtggctcggcggcaag
ccttactgggccggaatccagctcgacgagacggcgtttccggtgctgctcgcgtccagc
ctggccgcacgcgacgcgctgggcggcatgcgggtcgccgacagcgtccgccgcgcgctc
gccttcctgatcctcaacggccccgcgagcccgcaggaccgctgggaggaggacgcgggc
gtcaatccgttcacgatggcggtctgcatcgccgcgctggtcgccggcgcggccctgctg
cccgagccggagcgtgcgctgccgctcgcggtcgccgatttctggaatgcgcgcctggag
gactggtgcgtcgtgcgcgacaccgaactcggggcgcggcacggcgcgcccgcctactac
atacgcgaggcgccgaccgccatcctctgcgacgaccgcgccatgcagcgcgccctgccg
atcaacaaccacagctacgacctcgcgcttccggcgagcgagcaggtcgccaccgacttc
ctgcagctggtgcggctggggctgcggcgcgccgacgatcgcctggtgtgcgattcgctg
aagctggtcgacgcgctgctcaagaccgatacgccctacggcccggtctggcaccgctac
aacggcgacggctatggcgaacatcaggacgggcgcccgttcgacggggccggccgcggg
cggggctggccgctgctgaccggcgaacgcggccattacgaactcgcggccgggcgcgac
ccgctgccttatctgcgggccatggccgcgatggcgcggcgcggcctgatcccggaacag
gtctgggacgatcggccgcgcgccgggttccggcccggcgagccgaccggcggcgccatg
ccgcttgcgtgggcgcatgccgaattcatcaagcttgcggcgtcgcgcgcggcagggcgg
ccgatcgatcgcctcgaaacggtctgggcccgctatcgtggcgtgcggcccgaagcggcc
tggacgatctggacccgcggcgcgccgctcacccgtcgccagccggggacgggcgtgtgg
atcatcctgcccgagccggcgatggtgcacgtcggattcgacggctggcacgcggtcgcc
gacgagccgacgctcgcccacggcgccgcgcttcacggcgtgcagctcgacgccgcccgg
ctcgccgggtgccgtcgcctggacttcacctggcgcgcgctgcgcagcgggcagtggcat
gacggggtggcgtcgatcgagctcgtctga
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