Candidatus Thiodictyon syntrophicum: THSYN_32310
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Entry
THSYN_32310 CDS
T05211
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy01501
beta-Lactam resistance
tsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
THSYN_32310
01503 Cationic antimicrobial peptide (CAMP) resistance
THSYN_32310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsy02000
]
THSYN_32310
01504 Antimicrobial resistance genes [BR:
tsy01504
]
THSYN_32310
Transporters [BR:
tsy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
THSYN_32310
Antimicrobial resistance genes [BR:
tsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
THSYN_32310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AUB85589
UniProt:
A0A2K8UJE3
LinkDB
All DBs
Position
pTs485:complement(305785..308964)
Genome browser
AA seq
1059 aa
AA seq
DB search
MPRFFIDRPIFAWVIAILITLAGGVAALNLPVSAYPPIAPPQISITASYPGASAEVMEKT
VTSVIEQQLTGVDDLLYFDSVSRGVGQAQITLTFETGTNPDIAQVQVQNRLSVAEPRLPR
DVVQNGLVVAKANADFLMVVALRSSDPALDSNALDNLIAAQLLDPIRRLPGVGGATQFGS
GYAMRIWLDPDKLRGFGLSAATALAAVVGQNIQVAAGNIGSMPALPGQGFTASVTAANRF
TTTDEFGEIILHANPDGSNVQLKDVARIALGAESFGRDVHLGADAVAGFAIQLAPEANAL
EVAAAVRAKMDELIHYLPAGVSWLSPYDSTQFVRISIQEVVKTLVEAVVLVFLVILLFLQ
NLRATLIPTLVVPVALTGAFAGMFLAGFSINVLSLFALVLAIGLVVDDAIVVVENVERLM
TEEGLSPKEAARKGMDQITGAVIAMTLVLAAVFIPMALVGGSVGVIYRQFSLTIVISMGI
SALMALSFTPALCATLLKPAHEPNWFLRGFNRGYNAIAGAYLRRVAKAIRHTPRWMVSFT
ALLVLAGWLFTQLPSGFLPEEDQGYAFAIVQLPPGATMQRTTAVLQEMDQILRKNPAVDR
AMLVAGFSFVGQGENVALGFIRLKDWDVRTKPAEQIKAFIPAINGALQAVKGARIFVVNM
PTVRGLGRFGGFDFRLQDRAGLGHAQLMQARNTLLGAAAKAPDLAGVRPNQLEDGPQVRF
TVDRLQAQAMGLDLADIYGAIKLMLAPVYANDFNYQGRVLKVLLQADAAFRSRPEDLARY
FIPSQGGGLDDMVPLSSVVSADWTLAPPAIDHYNGFEAIQINGGASPGHSSGQAMAAMEK
IVATELPPGIGFEWSGASLQEIISGKQAPILFALSLAVVFLALAALYESWSVPAAVMLVV
PLGVLGALSFTWLRGLENDVYFKVGLIAVIGLSAKNAILIIEFANTMHQSGRGLYESVME
AARLRLRPIVMTSIAFILGVTPLVISSGAGANSRHAIGTGVMGGMVGATLLGVLFVPVFY
VVVRRLLGDRLEGDKAQGAGADACGQTEEGPQGNATQRG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgccccgttttttcatcgaccgccccatcttcgcctgggtcatcgccatcctcatcacc
ctggccggcggtgtggccgcactcaacctgccggtctcggcctatccgcccatcgccccg
ccgcagatcagcatcaccgcctcctacccgggggcgagcgcggaggtcatggagaagacc
gtcacctcggtcatcgagcagcagctcaccggggtggatgacctgctctatttcgactcc
gtctcgcgcggggtcggccaggctcagatcaccctgaccttcgagaccggcaccaatccg
gacatcgcccaggtccaggtacagaatcgcctgagtgtggccgagccgcgcctgccccgg
gacgtggtgcaaaacggtctggtggtcgccaaggccaacgccgacttcctgatggtggtg
gcgctgcgttccagcgacccggcgctcgacagcaacgcactcgataacctgatcgcggcc
cagctcctggaccccatccggcgcctccccggcgtgggcggggccacccagttcggctcc
ggctacgccatgcgcatctggctcgaccccgacaagctgcgcggtttcgggctcagcgcc
gcgacggccctggcggcggtcgtcggccagaacatccaggtggccgccggcaacatcggc
tctatgccggccctgcccggccagggcttcaccgcctcggtgaccgccgccaaccgcttc
acgaccacggacgagttcggcgagatcatcctgcacgccaatccggacggcagtaatgtt
caattgaaagacgtcgcccgcatcgcgctcggggccgagtccttcgggcgcgacgtccac
ctgggggcggacgcggtggccggcttcgccatccaactcgccccggaggccaatgcactg
gaggtggccgcggcggtgcgggccaagatggacgagttgattcactatctgcccgccggg
gtgtcgtggctgagcccctatgacagcacccaattcgtgcgtatctctatccaagaggtc
gtcaagaccctggtggaggcagtcgtcctggtctttctggtgattctgctgtttctgcag
aacctgcgcgccacgctcattccgaccctggtggtgccggtggcgctcaccggggccttt
gccggcatgttcctggcgggtttctcgatcaatgtgctgagcctcttcgccctggtgctg
gccatcggtctggtggtggacgacgccatcgtggtggtggagaacgtggaacggctgatg
accgaggagggcctgtcgcccaaggaggcggcacgcaaggggatggaccagatcaccggg
gccgtgatcgccatgacgctggtgctggcggcggtcttcatcccgatggccctggtgggc
ggcagcgtgggggtcatctaccgccaattctcgctgaccatcgtgatttccatgggcatc
tccgccctcatggcgctgagcttcaccccggccctgtgcgccaccctgctcaagcccgcc
catgagcccaattggttcctgcgcggcttcaaccgcggctacaacgcgattgccggggcc
tatctgcgccgcgtcgccaaggcgatccgccacacgccgcgctggatggtctcgtttacc
gcgctgctggtcctggccggctggctcttcacccaattgccgtctggctttctgccggag
gaggaccagggctatgccttcgccatcgtgcaattgccccccggggccaccatgcagcgc
acgaccgcggtcttgcaggagatggaccagatcctgcggaagaacccggcggtcgaccgt
gccatgctggtggccgggttcagcttcgtcggccaaggggagaacgtggccctgggcttt
atccggctcaaggactgggatgtccgcaccaagcccgcggagcagatcaaggccttcatc
ccggccatcaacggcgccctgcaggcggtcaagggggcgcgtatcttcgtggtcaacatg
ccgacggtgcgcgggctcggccgcttcggcggcttcgacttccggctacaggaccgcgcc
ggtctgggccacgcccagttgatgcaggcgcgcaatacgctgctcggcgccgcggccaag
gccccggatttggccggggtccgccccaatcaattggaggacggaccccaggtccgcttc
accgtggaccgcctccaggcccaggccatggggctcgacctcgccgacatctatggcgcc
atcaagctcatgctggccccggtctatgccaatgacttcaattaccaggggcgggtgctc
aaggtcttgctccaggccgatgccgccttccgcagccgccccgaggacctggcgcgctat
ttcatccccagccaggggggcgggctggacgatatggtccccttgagttcagtggtgagc
gcggactggaccctggccccgcccgccatcgatcactacaacggcttcgaggcgatccag
atcaacggcggcgccagccccggtcacagctccggccaggccatggcggcgatggagaag
atcgtcgccaccgagctgcccccggggatcggcttcgagtggtccggggcctcgctccag
gagatcatctccggcaagcaggcgcccatcctgttcgccctgtcgctggccgtggtcttc
ctggcgctcgccgcgctctatgagagctggtcggtgccggcggcggtcatgctggtggtc
ccgctgggcgtgttgggggcactctcattcacctggctgcgcggcctggagaacgatgtc
tatttcaaggtcgggctgattgcggtcatcggactctcggccaagaacgccatcctcatc
atcgaattcgccaacaccatgcaccagtcggggcgcggcctgtatgagtcggtcatggag
gccgcccggctgcgcctgcgccccattgtcatgacctccatcgccttcatcctgggcgtc
acgccgctcgtcatctccagcggcgccggggccaacagccgccacgccatcggcaccggg
gtcatgggcggaatggtcggcgccacgctgctgggggtgctgttcgtgccggtcttctat
gtggtggtgcggcgcctgctcggggaccggctggagggggacaaggcgcaaggggcgggt
gcggacgcctgcggtcagacagaggaaggtccgcaaggcaacgcaacccaacgcggctag
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