KEGG   Thiohalobacter thiocyanaticus: FOKN1_0964
Entry
FOKN1_0964        CDS       T05229                                 
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ttc  Thiohalobacter thiocyanaticus
Pathway
ttc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ttc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FOKN1_0964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ttc03400]
    FOKN1_0964
Enzymes [BR:ttc01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     FOKN1_0964
DNA repair and recombination proteins [BR:ttc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     FOKN1_0964
 Prokaryotic type
     FOKN1_0964
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_5 HHH_8
Other DBs
NCBI-ProteinID: BAZ93364
UniProt: A0A1Z4VQ66
LinkDB
Position
complement(1006163..1006810)
AA seq 215 aa
MNKSKREAIFKRFQEANPDPTTELHYGNRFQLLIAVILSAQATDRSVNQATAALFRQVRT
PQAMLELGEAGLKRHIRTIGLYNSKASNIIATCRILAERHGGRVPGEREALEALPGVGRK
TANVILNTAFGEPTIAVDTHIFRVANRTGIAPGKTVLQVEKKLLKVVPEPYLRNAHHWLI
LHGRYTCTARRPRCPGCLIHDLCEYRHKSEPVERP
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaacaagtccaagcgcgaggccattttcaagcgcttccaggaagccaaccccgacccg
accaccgagttgcattacggcaaccgtttccagctgctgatcgcggtgatcctctccgcc
caggccaccgaccgcagtgtgaaccaggccacggccgccctgtttcgccaggtccgcacc
cctcaggccatgctcgaacttggcgaggcaggtctgaagcggcacatcaggaccatcggc
ctgtacaacagcaaggccagcaacatcattgccacctgccgcatcctggccgagcggcac
ggcggccgggtaccgggcgagcgcgaggcactcgaggccctgcccggcgtggggcgcaag
accgccaacgtgatcctcaatactgccttcggtgaaccgaccatcgccgtcgacactcat
atattccgcgtggccaaccgcaccggcatcgcccccgggaagaccgtgctgcaggtcgaa
aaaaaactgctcaaggtcgtgcccgaaccctatctcaggaacgcgcaccactggctgatc
ctgcacggtcgctatacctgcaccgcacgccggccgcgctgtccgggctgtctgatccat
gatctgtgcgagtaccggcacaagtcagagccggtcgaaaggccctag

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