Thermus thermophilus HB27: TT_C0732
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Entry
TT_C0732 CDS
T00170
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
tth
Thermus thermophilus HB27
Pathway
tth03030
DNA replication
tth03410
Base excision repair
tth03420
Nucleotide excision repair
tth03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TT_C0732
03410 Base excision repair
TT_C0732
03420 Nucleotide excision repair
TT_C0732
03430 Mismatch repair
TT_C0732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tth03032
]
TT_C0732
03400 DNA repair and recombination proteins [BR:
tth03400
]
TT_C0732
Enzymes [BR:
tth01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
TT_C0732
DNA replication proteins [BR:
tth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
TT_C0732
DNA repair and recombination proteins [BR:
tth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
TT_C0732
NER (nucleotide excision repair)
GGR (global genome repair) factors
TT_C0732
MMR (mismatch excision repair)
DNA ligase
TT_C0732
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TT_C0732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
DNA_ligase_ZBD
BRCT_2
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AAS81080
UniProt:
Q72JN8
LinkDB
All DBs
Position
complement(715856..717886)
Genome browser
AA seq
676 aa
AA seq
DB search
MTLEEARKRVNELRDLIRYHNYRYYVLADPEISDAEYDRLLRELKELEERFPELKSPDSP
TEQVGARPLEATFRPVRHPTRMYSLDNAFNFDELKAFEERIERALGREGPFAYTVEHKVD
GLSVNLYYEDGVLVYGATRGDGEVGEEVTQNLLTIPTIPRRLKGVPERLEVRGEVYMPVE
AFLRLNEELEERGERIFKNPRNAAAGSLRQKDPRITAKRGLRATFYALGLGLEEVEREGV
ATQFALLHWLKEKGFPVEHGYARAVGAEGVEAVYQDWLKKRRALPFEADGVVVKLDELAL
WRELGYTARAPRFAIAYKFPAEEKETRLLDVVFQVGRTGRVTPVGILEPVFLEGSEVSRV
TLHNESYIEELDIRIGDWVLVHKAGGVIPEVLRVLKERRTGEERPIRWPETCPECGHRLL
KEGKVHRCPNPLCPAKRFEAIRHFASRKAMDIQGLGEKLIERLLEKGLVKDVADLYRLRK
EDLVGLERMGEKSAQNLLRQIEESKRRGLERLLYALGLPGVGEVLARNLAARFGNMDRLL
EASLEELLEVEEVGELTARAILETLKDPAFRDLVRRLKEAGVEMEAKEKGGEALKGLTFV
ITGELSRPREEVKALLRRLGAKVTDSVSRKTSYLVVGENPGSKLEKARALGVPTLTEEEL
YRLLEARTGKKAEELV
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaccctggaagaggcgaggaagcgggtaaacgagttacgggaccttatccgctaccac
aactaccgctactacgtcctggcggacccggagatctccgacgccgagtacgaccggctt
cttagggagctcaaggagcttgaggagcgcttccccgagctcaaaagcccggactccccc
acggagcaagtgggggcgaggcctttggaggccaccttccgccccgtccgccaccccacc
cgcatgtactccttggacaatgcctttaactttgacgagctcaaggcctttgaggaacgg
atagaacgggccctggggcgggagggccccttcgcctacaccgtggagcacaaggtggac
gggctttccgtgaacctctactacgaggacggggtcctggtctacggggccacccggggg
gacggggaggtgggggaggaggtgacccagaacctcctcaccatccccaccatcccgagg
aggctcaagggggtgccggagcgcctcgaggtccggggcgaggtctacatgcccgtagag
gccttcctccggctcaacgaggagctggaggagcggggggagaggatcttcaaaaacccc
aggaacgcggcggcgggttccttaaggcaaaaagacccccgcatcaccgccaagcggggc
ctccgggccaccttctacgccttagggcttgggctggaggaggtggagagggaaggggtg
gcgacccagtttgccctcctccactggctcaaggaaaaaggcttccccgtggagcacggc
tacgcccgggccgtgggggcggaaggggtggaggcggtctaccaggactggctcaagaag
cggcgggcgcttccctttgaggcggacggggtggtggtgaagctggacgagcttgccctt
tggcgggagctcggctacaccgcccgcgccccccggttcgccatcgcctacaagttcccc
gccgaggagaaggagacccggcttttggacgtggtcttccaggtggggcgcaccgggcgg
gtgacccccgtggggatcctggagcccgtcttcctagagggcagcgaggtctcccgggtc
accctgcacaacgagagctacatagaggagctggacatccgcatcggggactgggttttg
gtgcacaaggcgggaggggtcatccccgaggtcctccgggtcctcaaggagaggcgcacg
ggggaggaaaggcccattcgctggcccgagacctgccccgagtgcggccaccgcctcctc
aaggaggggaaggtccaccggtgccccaaccccttgtgccccgccaagcgctttgaggcc
atccgccacttcgcctcccgcaaggccatggacatccagggtctgggggagaagctcatt
gagaggcttttggagaagggcctggtcaaggacgtggccgacctctaccgcttgagaaag
gaagacctggtgggcctggagcgcatgggggagaagagcgcccaaaacctcctccgccag
atagaggagagcaagcgccggggcctggagcgcctcctctacgccttggggcttcccggg
gtgggggaggtcttggcccggaacctggcggcccgcttcgggaacatggaccgcctcctc
gaggccagcctggaggagctcttggaggtggaggaggtgggggagctcacggcgagggcc
atcttggagaccttaaaagaccccgccttccgcgacctggtgcgaaggctcaaggaggcg
ggggtggagatggaggccaaggagaagggcggggaggcccttaaagggctcaccttcgtg
atcacgggggagctttcccgcccccgggaagaggtgaaggccctcctaaggcgcctcggg
gccaaggtgacggactccgtgagccggaagacgagctacctcgtggtgggggagaacccg
gggagcaagctggagaaggccagggccctcggggtccccaccctcacggaggaggagctc
taccgcctcctggaggcgcggacggggaagaaggcggaggagctcgtctaa
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