Thermothielavioides terrestris: THITE_2107200
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Entry
THITE_2107200 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
THITE_2107200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2107200
Enzymes [BR:
ttt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
THITE_2107200
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
THITE_2107200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
11517645
NCBI-ProteinID:
XP_003649053
JGI:
Thite2_2107200
UniProt:
G2QTA0
LinkDB
All DBs
Position
1:complement(join(2027132..2029142,2029217..2029299,2029358..2029451,2029502..2030100,2030160..2030504))
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AA seq
1043 aa
AA seq
DB search
MPFLFSYVCDLLQRLEDNQHARSGLRSNAAIIQEWFRAHQGLLHRDDHNSAALLSALLPE
KRTDRVYFIREKKLQIIIGRALGLGRSRIAQLGRWSNPDARIDLAGCVEGILNETPNPIS
PAHRPVTVDEIDQLLHGVAANCRFSSPAVRSSAPENCPAHKELALGELYKRLSARDAKWL
TRLILKNYAPVILNEHVVYTSCHPLLPLILKVQDDFTVAGRILDTQRRERTVTGSNDLAG
YLKPTLGVKIGRQMWLKGRSIKHCLSMVQGRVSCEEKIDGEYCQVHIDLSKGYDCIQIFS
KSGKDSTKDRQALHDSIRKSLQLGQPSCPLKRGCILEGELVVYSDKHSKVLDFHKIRKHV
SRSGSFLGTDKDSQPHPWEHLMIVYYDLLMVDDESLLAVKHSERFQRLKKLITPVPGRSA
LVKREIIDCTRPSAVSDLRRAFAKCITARGEGLVLKADDPYFDFGTLRRPYSCCPIKLKK
EYIGNFGDIGDFAVVGARFDATKARTYTNIPRLKWTHFYVGCLDNKEEVQRFGKRPRFVV
TNVVELNAIQLETFTTSVNPDSVRPEDNTAIDLRIEPGVDNGKRPSVIFPTPPVVDLRCF
SFGKEGNTGFWSPRFPSVSKIHCDRTYHDAISFAELQEMAAKEKEAPPPEDSQELLGWIA
ALEKSERKTAVDTTSQSTTSTNTASMTPTPRDLDPSCRRDSPTPSPARRRSGQLTPPTSS
AAQLSESTTGDGVNKQAGTAPGRQRPFESSQQNSIPERSKIRRFSDDQDDDTLRGATSNP
ASFSSTQRRISLSRRNTEAHMPMPTLASSDSMHQPGAENSQPGTTGPARPPIQSSVSFHE
GPTCSFPAQSPPDSTNSGPPTQVNTSQSPEESPAPSAGKCRYLGDACAFSTYSILLSPCI
ANFPWVTEDLLSCHGVTEFLRDPKEWLADQAATSTTTPASSSSGIPGASLSAPAGQKGRR
KRKIVLVDARRREATVAFLQLVEAAQLKRRSGEREYVPVYDWRVLEAVREEEQKLARSRE
RPRSRLDIISSSGVGRRFWVGLA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgccctttctcttttcctatgtatgcgacctcttgcagcgccttgaagacaaccagcat
gctcgctcggggctgagaagcaacgcggccatcatccaggaatggttccgtgctcaccag
gggctgcttcaccgcgacgaccataacagtgctgctctactctcggcacttctgccagaa
aagaggactgacagagtctatttcattcgggagaagaaactccagatcatcattggccgt
gcgctgggtctgggccggtcgcgcatcgcgcagctgggaagatggagcaaccctgatgcg
cgcatcgacttggccggctgcgttgagggtatcttgaacgagacaccaaatccaatatcc
cccgctcataggcctgtcacggtggacgagatcgatcaactcctccatggggtcgcagcc
aactgtcgcttcagttcacccgcagtccgtagttcggctcctgagaactgcccagcccac
aaggagctcgcccttggggaactgtacaagcggctgtctgcccgagacgccaaatggctc
acccgcctgatcctgaagaactacgcgcctgtcattcttaatgagcacgtcgtttatacg
agctgtcatcctcttcttccattgatattgaaggtccaagatgacttcactgtcgctgga
cgtatcctggacacgcagcgtcgtgagcgcacggttactggaagtaacgacctcgccggg
tatctaaagcccaccttaggagtcaagatcggccgccaaatgtggctcaagggccggagc
atcaaacactgcttgtccatggtccaaggccgtgtgagctgcgaggagaaaatagatggc
gagtactgccaggtccatatcgacctcagcaagggctacgattgcattcaaatattctca
aagagcggcaaggacagcaccaaagaccgccaggcattgcatgactcgatccgaaagtca
ttgcagcttgggcagccctcctgccccctgaagcgaggctgcatccttgagggagaactg
gtggtctacagtgataagcactccaaggttctcgacttccacaagattcggaagcatgtc
tcgagatccggttcctttttgggcactgataaagactcacagcctcacccctgggagcat
cttatgattgtctactacgacctactcatggtcgacgatgaatccttgttggccgtcaag
cactcggagagattccagcgtctcaagaagctcatcacaccagtaccaggccgatctgct
ctggtcaaacgagaaattattgactgcacacggccatctgcagtctcggacctgcgccgc
gcctttgcaaaatgtatcacggcgcgtggggaaggcctggtcctcaaagcagatgaccct
tactttgactttgggaccctgcggcgaccttatagttgctgcccaattaagctcaagaaa
gagtatattggcaattttggagacatcggagacttcgctgtcgtcggcgcccgcttcgat
gccacaaaggcccgaacctacaccaacatccctaggctcaagtggacgcatttctatgtg
ggctgtctcgataacaaagaagaggtgcagcgctttgggaagcggccgcggttcgtcgtc
acgaatgttgttgaactcaacgcaatccagctggagacgttcaccacgtccgtcaacccg
gactccgtgcggccggaggataacacggccatcgacctacgaattgagcccggtgtcgat
aacgggaagcgcccatctgtgattttccccacacccccggtggttgacctccgctgcttt
tcttttggcaaggaagggaacacgggcttttggagcccgagatttccatcggtaagcaag
atacattgtgacagaacttaccacgacgcaatctccttcgccgagctgcaagagatggca
gccaaggagaaggaggcgcctcctccggaagacagccaggagcttctgggttggatcgca
gctctggagaaatccgaacggaagaccgctgtcgacactaccagtcaatcgacgacttcg
acaaatacagcgtcaatgacgccaacgcctcgagacctggatccaagctgccgtcgggat
tcgccgacgcccagcccggcgagaagaagaagtggccagttgacaccgccaacgtcatcc
gccgctcaattgtccgagtcgacaaccggagacggagtgaacaagcaggcagggaccgcg
ccaggtcgacagaggccgtttgagtcctcacaacagaacagcatcccggagaggagcaag
atccggaggttctcagacgaccaggatgacgacacgcttcgtggagcaacgagcaatccg
gcgagtttctcctcgactcagcgaagaataagtctatcacgccgcaataccgaagctcat
atgcccatgccgacgctggcgagctcagactcgatgcaccagcctggtgctgagaattcg
cagcccggcactactggcccggcccgacctcccattcagtcgtccgtgtccttccacgag
gggccgacttgttcgtttcctgcccaatctcccccggactcgacgaacagcggcccgcca
acgcaagtcaacacctcccagtcgcccgaggagtcccctgcgccatctgccggaaagtgc
cgctacctcggcgacgcatgcgcgttctcgacgtactcgatcctgctctcaccatgcatc
gccaacttcccctgggtcacggaggacctgctctcgtgccacggcgtgaccgagttcctc
cgcgatcccaaggagtggctggccgaccaggcggcgacgagcacaacaaccccggcttca
agcagcagcggcattcccggagcttcgctctccgcaccggccggccagaagggccggcgt
aagaggaagatcgtactggtggacgcccgccggcgggaggctaccgtggcgtttctgcaa
ttggtcgaggcggcacagctgaagcgccgcagcggcgagcgggagtacgtgccggtgtat
gactggcgggtgcttgaggccgtgcgggaagaggagcagaagctcgcgaggagcagggag
aggccacggtcccggctcgatatcatcagctccagcggcgtggggagacggttctgggtt
gggctggcgtag
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