Thermothielavioides terrestris: THITE_2122032
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Entry
THITE_2122032 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THITE_2122032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ttt03041
]
THITE_2122032
Spliceosome [BR:
ttt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
THITE_2122032
Complex C
U5 SnRNP specific factors
THITE_2122032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Motif
Other DBs
NCBI-GeneID:
11519334
NCBI-ProteinID:
XP_003656837
JGI:
Thite2_2122032
UniProt:
G2RFL8
LinkDB
All DBs
Position
5:join(2514235..2514397,2514475..2515626,2515675..2516666,2516791..2516878,2517109..2517674)
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AA seq
986 aa
AA seq
DB search
MDDDLYDEFGNFIGEEVEASEEESEHGVDVGNYAYDEYPEAAPEAPAEERMDIDDEGPSN
AVVLHEDKQYYPTAAQVYGEGVETLVQEEDAQPLTQPIIAPIEQKKFSIEEADLPPVYFD
RNFMTDLMNYPEQIRNIALAGHLHHGKTAFMDMLVLETHAITDRLEKRTGKKRDEQLRYT
DTHVIERDRGLSIKAAPMSLVLSSSKGKSHLFNIIDTPGHVDFVDEVAASLRLVDGVCLV
VDVVEGVQVNTEQIIKHAVLEDIPLTLVVNKMDRLILELKLPPNDAYYKLKHVIEEVNTV
IENTIPGRGAERRISPEKGNVLFACTSMGWCFTLRSFAKMYSDSFGGVNVDEFARRLWGD
VYFNPRKRTFTRKAVEEGAKRSFVNFIMEPIYKLFSHTISESPEDLKGTLGKLGIQLKPS
QYKADAKVLLKLVCEQFFGPSTGFVDMVCQHIPSPVEAAEKKLAQYYTGPMDTKVAESMK
KCDQNGPLVIHVTKLFNTTDAKSFYSFGRVMSGIARPGMEVRVLGEGYSIDDEEDMVLAR
VSGVYIAETRYNISTDGVPAGNWVLLSGVDNSIVKTATIVDKKVDNDEAAYIFKPLSHFT
ESVLKVAVEPINPSELPKMLDGIRKINKSYPLVATKVEESGEHIVLGTGELYMDCVLHDL
RRLYADMEIRVSDPVVRFCETVQDMSATKCYAVTPNKKNTITMAAEPLDDGIAKDIESGA
VKIRDPPRKTAKFFEEKYGWDMLAARSIWAFGPDDMGPNILQDDTLPTEVDKKRLNTVKE
SIRQGFSWATREGPLCEEPIRNTKFRLIDVSLAQEAIFRGGGQIIPTARRACYSSFLMAS
PRLMEPVYSVSMTGPQDSVSTVYNILARRRGHVLSDGPIAGTPLYRVSGLLPVIDSFGFE
TDLRINTPGRAMVSLVFDRWSIVPGDPLDRDMVTRPLQMAAPLATARDFVLKTRRRKGLS
EDVTVAKFLEPEFYQSLIESGTLEGL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgatctatacgacgagttcggcaacttcattggcgaagaggtcgaagcctcc
gaggaagagtccgaacatggcgtcgacgtgggcaactatgcctacgacgagtaccccgag
gcggccccagaagctcccgccgaggagcgcatggacatcgacgatgaagggccatcgaat
gccgtcgtcctgcacgaggacaagcagtactatccgaccgcggcgcaggtgtacggagag
ggcgtcgagacgctggtgcaggaggaggatgcgcaacccctgacgcaacccataattgcg
cccatcgagcagaagaagttcagcattgaggaggcagacctgccgcccgtctacttcgac
cgcaatttcatgaccgatctcatgaactacccggaacagatccgcaacatcgcactggcg
ggccatctgcaccacggcaagacggccttcatggacatgctcgtcctcgagacgcacgcc
ataacggacaggttggagaagcggacagggaagaagcgcgacgagcagctcaggtacacg
gatacccatgtgattgagcgggaccggggcctgtccatcaaggccgcacccatgagcctc
gtgctctccagcagcaaagggaaatcgcatctcttcaacatcatcgacacccccgggcat
gttgactttgtcgacgaggtggccgcgtccctccggctggtggacggcgtgtgtctggtg
gttgatgtggtggaaggggtgcaggttaacacggagcagatcatcaagcacgccgtcctt
gaggatatccccctcaccttggtcgtgaacaagatggaccggttaatccttgagctcaag
ctgccacccaacgacgcctactacaagctgaaacacgtcatcgaggaggtcaacaccgtc
attgagaacaccattcctgggcgaggcgcggagaggaggattagcccggagaaggggaat
gtgctcttcgcctgcacctccatgggatggtgcttcacgttgcggtcgtttgccaagatg
tactcggacagctttggcggcgtcaacgttgacgagtttgctcggcgcttgtggggcgat
gtctacttcaacccccgaaaacggaccttcacaaggaaagccgttgaggagggtgcgaag
aggtcattcgtcaattttatcatggagccgatatacaaactcttctctcacacgatcagt
gagagccccgaggatctgaaggggacgctcgggaagctgggaatccagctgaagccttct
cagtataaggcagatgcaaaggtcttattgaagctagtctgcgagcagttctttgggccg
tcgaccgggttcgttgacatggtctgtcagcatattccctcaccagttgaggctgccgag
aagaagctggcgcagtactacaccggccccatggacaccaaggtcgcagagtcgatgaag
aagtgcgatcagaacgggccacttgtcatccacgtaaccaagttgttcaacaccaccgac
gccaagagcttctactcgttcgggcgcgtcatgagcggcattgcgcggccaggaatggag
gtccgggtgcttggagagggctactctatcgacgacgaggaagacatggtgttggcgagg
gtctcaggcgtgtacatcgccgaaacgcgctacaacatctcgacagacggcgtgccagcg
ggtaactgggtcctcttgtcaggtgttgacaactcgatcgtcaagacagccaccatcgtc
gacaagaaagtcgacaatgacgaggcggcctacatcttcaagccattatcccactttacc
gagtctgtcctcaaggttgccgtggaacccattaacccgtccgagctgccaaagatgctc
gacggcatcagaaagattaacaagagctatccgttggttgcgacgaaagtcgaggagtcg
ggagagcacatcgtgctcggcacgggcgagctgtacatggactgcgtgctccacgacctg
cgccgcctctacgccgacatggaaatcagagtgtccgacccggtcgtccgtttctgcgag
acagtgcaggacatgtcggctacgaaatgctacgccgtcacgcctaacaaaaagaacaca
atcaccatggcggccgaaccgctcgacgatgggattgccaaggacatcgagtcaggcgcg
gtgaagatacgggaccctccgcggaagacggctaagttcttcgaggagaagtacggatgg
gacatgcttgccgccaggagcatctgggcgttcgggcccgacgacatgggcccgaatata
ctccaggatgacacattaccaacagaggttgacaagaagcggctaaacacggtcaaggaa
tcgatccgtcaggggttcagttgggcaacccgagaggggcctctctgtgaagagcccata
cgcaacaccaaattccgactcatcgacgtctccctcgcacaagaagccatcttccgcggc
ggggggcagatcatccccacggcgcgccgggcctgctacagctccttcctgatggcgtcg
ccgcggctgatggagcccgtgtactcggtctcgatgacgggcccgcaggactcggtcagc
acggtgtacaacatcctggcgcggcggcgcggccacgtgctgtcggacggcccgatcgcg
ggcacgccgctgtaccgcgtcagcggcctgctgcccgtcatcgactcgttcggcttcgag
acggacctgcgcatcaacacgcccggccgcgccatggtcagcctcgtcttcgaccgctgg
agcatcgtgcccggcgacccgctcgacagggacatggtcacccgcccgctgcagatggcc
gccccgctggccaccgccagggactttgtcctcaagacccgcaggcggaagggcctgagc
gaggacgtcaccgtcgccaagttcttggagcccgagttctaccagagcttgatcgagtcg
ggtactctggaggggctgtga
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