KEGG   Thunnus thynnus (Atlantic bluefin tuna): 137170566
Entry
137170566         CDS       T11154                                 
Symbol
traf2b
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
tty  Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04010  MAPK signaling pathway
tty04137  Mitophagy - animal
tty04141  Protein processing in endoplasmic reticulum
tty04210  Apoptosis
tty04217  Necroptosis
tty04621  NOD-like receptor signaling pathway
tty04622  RIG-I-like receptor signaling pathway
tty04920  Adipocytokine signaling pathway
tty05132  Salmonella infection
tty05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:tty00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    137170566 (traf2b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    137170566 (traf2b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    137170566 (traf2b)
  09143 Cell growth and death
   04210 Apoptosis
    137170566 (traf2b)
   04217 Necroptosis
    137170566 (traf2b)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    137170566 (traf2b)
   04622 RIG-I-like receptor signaling pathway
    137170566 (traf2b)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    137170566 (traf2b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    137170566 (traf2b)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    137170566 (traf2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tty03019]
    137170566 (traf2b)
   04121 Ubiquitin system [BR:tty04121]
    137170566 (traf2b)
Enzymes [BR:tty01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137170566 (traf2b)
Messenger RNA biogenesis [BR:tty03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     137170566 (traf2b)
Ubiquitin system [BR:tty04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    137170566 (traf2b)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_3 zf-RING_6 zf-RING_2 RING_XB3-XBAT31 zf-RING_UBOX ATG16 Sina_ZnF zf-C3HC4_5 TRAFD1-XIAF1_ZnF CCDC110 PhiKZ_gp86 ASRT
Other DBs
NCBI-GeneID: 137170566
NCBI-ProteinID: XP_067430123
LinkDB
Position
19:complement(14361689..14378568)
AA seq 522 aa
MARISLDCPNSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCFKQLTSS
GPKPCEACRQEEIYEEPISILNSSEAFPDNAAGREIASLPARCLNQGCTWTGSIKEYEAQ
HEGRCEFERIQCEACQTLILRTEKDRHNERECEARTLNCKYCKLTFNFKEIKAHDEICLK
FPLQCKDCGKKKIPREKFNDHSRSCAKSKSACPFSEVGCKSVIENGKLSDHEHSSTMEHL
RLLLPMVLSMAKPSAEASGPGEWQEDSGLGLYRAPEEGVAMGAGAGAAASTQSVDLEKKV
NALENIVCVLNREVERSSVTLEAFSHQHRLDQEKIENLSNKVRQLERTLTMRDLQLSETE
QMVRELQYCTYDGIFVWKISDFSRRRQEAVAGRTPAMFSPAFYSSKYGYKMCLRLYLNGD
GTGRGTHLSLFFVVMGGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRP
ISEMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggcccgaatctcgttggattgtcccaactctttaccagggatccccctcagtgtgctg
tcagtgcccatggagaataagtacaaatgtcagcagtgtctccaggtcctgaggaagcct
gtccaggcccagtgcggccaccgcttctgtgtacattgcttcaagcagctcaccagttct
ggcccaaagccttgtgaagcctgccgccaagaggaaatatatgaggagcctatttccata
ctaaatagtagtgaggcatttccagacaatgcagcaggtcgagaaatagcaagtctgcct
gctaggtgtttgaaccagggctgtacttggacaggctcaataaaagaatatgaggctcag
catgaaggtcgctgtgaatttgagcgaatacagtgtgaggcctgccaaaccttaatcctt
cgtacagagaaggacagacataatgagagagaatgtgaagcaagaacactcaactgcaaa
tactgcaaattgaccttcaactttaaagagatcaaggcccatgacgagatatgcctgaag
ttccccttacaatgtaaagactgtggcaagaagaagatcccaagagaaaagttcaatgac
cacagcaggtcctgcgccaaatcaaagagtgcttgtccattcagtgaagtgggctgtaaa
tctgtgatagagaacgggaagctcagcgaccatgagcacagcagcaccatggagcacttg
cgtctgctgctgcccatggtgctgtctatggctaagccaagtgcagaggcttctggtccc
ggcgagtggcaggaagactctggtcttggcctgtacagggctcctgaggagggagtcgct
atgggcgctggagctggagccgcagcctccacgcagtctgtggacttggagaaaaaggtg
aacgccttagaaaacattgtttgtgtcctgaaccgggaagtggagcgcagttcagtaacg
ttggaagctttctcacatcagcatcgtttagaccaagaaaaaattgaaaatctgtctaat
aaagtgcggcagcttgagaggacgctgactatgagagatttgcagctgtctgagactgaa
cagatggtgcgagaactccagtactgcacctacgatggaatatttgtctggaaaatctct
gacttttcacgccgcagacaagaagctgtggctggtcgaacacctgcgatgttctcacca
gcgttttactccagcaaatacggctacaaaatgtgtctgagactgtatttgaatggtgac
gggacaggtcgagggacacacctttcactgttctttgttgtcatggggggcaagtgtgac
gctctgctcaaatggcctttcagtcagaaggtgacgctaatgctgttggatcagaacaac
agggagcacattattgatgctttccgccctgatgtcacttccacctcctttcagcggccg
atcagtgagatgaacatcgccagtggctgcccgctcttctgtccactggctaaactggcc
ggcaagagcccctatctgagagatgacacaattttcataaaagcaattgttgacctcaca
ggcttataa

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