Thunnus thynnus (Atlantic bluefin tuna): 137171040
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Entry
137171040 CDS
T11154
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04010
MAPK signaling pathway
tty04120
Ubiquitin mediated proteolysis
tty04140
Autophagy - animal
tty04144
Endocytosis
tty04517
IgSF CAM signaling
tty04620
Toll-like receptor signaling pathway
tty04621
NOD-like receptor signaling pathway
tty04622
RIG-I-like receptor signaling pathway
tty05132
Salmonella infection
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137171040 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
137171040 (traf6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
137171040 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
137171040 (traf6)
04140 Autophagy - animal
137171040 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137171040 (traf6)
04621 NOD-like receptor signaling pathway
137171040 (traf6)
04622 RIG-I-like receptor signaling pathway
137171040 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137171040 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
137171040 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tty04131
]
137171040 (traf6)
04121 Ubiquitin system [BR:
tty04121
]
137171040 (traf6)
Enzymes [BR:
tty01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137171040 (traf6)
Membrane trafficking [BR:
tty04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
137171040 (traf6)
Ubiquitin system [BR:
tty04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
137171040 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
TRAF6_Z2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
U-box
RING_XB3-XBAT31
TRAF3_RING
DM
zf-RING_11
zf-TRAF_2
Prok-RING_4
BLI1
CEP104_ZnF
zf-C2H2
Spc29
Motif
Other DBs
NCBI-GeneID:
137171040
NCBI-ProteinID:
XP_067430906
LinkDB
All DBs
Position
1:8651704..8658434
Genome browser
AA seq
571 aa
AA seq
DB search
MSCFVSNKGSLEEDSYEGAVGGELSGCALAMMEKEQESMLSPSESPGTFISSSSSSLQAA
TPVQGYDVEFDPPLESKYECPICLMALRNAIQTPCGHRFCKNCIEKSIRDTGQKCPVDNE
MLSQDQLFPDNFAKREILSLTVRCPNAGCADKMELRHLENHVAQCQFATVPCPQCQKSVR
KSHLEEHITVECQRRPVSCPDCVACFVYEERELHEQQCPFANVTCQYCEMVLIRDQMESH
CDTDCPKAPIACNFSTFGCKERMQRHNLAQHMQEFTQMHMRYMAEFLRGLSLNGTTPKSL
WALGHSVPPEDQGAAASASTSSGSRGSAGCSSNFASSQPSEEMQRLREMDKRLVKQDHQL
RELIILKETRAGQLAELQRRVSVLEETVKELEVQQCHGIFIWRLKGFTAHLRNQEAGLPV
VEHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGSFDGQLTWPFQGTIRLA
ILDQGPEGQHHMEVMETKPDLQAFQKPTIQRNPKGFGYVTFLHLNQLHQKAYVKDDTLLI
RCEVTPRFDSIFHREGPTVQPRGPEASVSRD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgctttgttagtaataaggggagtttggaggaggacagctatgagggagctgtt
ggtggagagctgtccggctgtgccttggcgatgatggaaaaggaacaagaatcgatgctc
agcccctcagagagccctggtaccttcatcagcagcagctccagtagtcttcaggctgct
acccctgtccagggctatgacgttgagtttgacccacctctagagagtaaatatgagtgc
cctatctgcctcatggctttaaggaatgccatccaaacaccctgtggtcaccgtttctgc
aagaactgcattgaaaagtccattcgtgatacaggacagaagtgccctgtggacaacgaa
atgctgtcacaagaccagctgtttcctgataacttcgcaaaacgggagattctctcgcta
actgttcgctgtccgaacgctggctgcgctgataaaatggagctccgacatttagagaat
catgtggcacagtgtcagtttgcaactgtgccttgcccgcagtgccaaaagtctgtgaga
aaaagccacctcgaggagcatataactgttgagtgccaaaggagacctgtgtcgtgtcca
gattgtgtggcctgctttgtgtatgaggagagagagcttcatgagcagcagtgtcccttt
gccaatgtcacgtgccagtactgtgagatggttctcatcagagaccagatggaatctcat
tgtgatacagattgcccaaaagcacccatcgcctgtaactttagcacctttggatgcaag
gaaaggatgcagcgccacaacctggctcagcacatgcaggagttcacacagatgcatatg
cgctacatggcagagttcctgcgtggccttagccttaatggcaccacaccaaaatccctc
tgggcgcttggacattctgttccccctgaagaccaaggagctgcagcatcagcatcaacc
tctagtggttccagaggatctgcaggctgcagcagcaactttgcctcatctcagcctagt
gaagagatgcagaggctccgggagatggataaacgactggtaaaacaggatcaccagctg
cgtgagctcatcatcctaaaagaaacgcgggcaggccagcttgcagagctccagcgtagg
gtgtctgtgctggaggagacagtaaaggagctggaggtccagcagtgccacggtatcttc
atctggcgcctcaaaggtttcactgcccacttgcggaaccaagaagcaggcctaccagta
gttgaacacagcccaggcttctacacaggtcgtccaggctacaaactgtgcctgcgctta
cacctgcagacccccaacgccccacgctgctccaactacatctccctgtttgtccacacc
atgcaaggatcttttgatgggcagctgacctggccgttccagggcaccatccgactcgct
atcctagaccagggccccgaaggtcagcaccacatggaggtgatggagactaagccagac
ctgcaagccttccagaagcccaccatccagcgcaaccctaaaggatttggctacgtgacc
tttctgcacctgaatcagctgcatcagaaggcctatgttaaagatgacactcttcttatc
cgctgtgaggtcacaccacgtttcgacagtatctttcaccgtgagggaccaacagtacaa
cctagagggcccgaggcctcagtttcaagggactaa
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