Thunnus thynnus (Atlantic bluefin tuna): 137171496
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Entry
137171496 CDS
T11154
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3 isoform X1
KO
K05411
interferon regulatory factor 3
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04620
Toll-like receptor signaling pathway
tty04621
NOD-like receptor signaling pathway
tty04622
RIG-I-like receptor signaling pathway
tty04623
Cytosolic DNA-sensing pathway
tty05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137171496 (irf3)
04621 NOD-like receptor signaling pathway
137171496 (irf3)
04622 RIG-I-like receptor signaling pathway
137171496 (irf3)
04623 Cytosolic DNA-sensing pathway
137171496 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
137171496 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137171496 (irf3)
04131 Membrane trafficking [BR:
tty04131
]
137171496 (irf3)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137171496 (irf3)
Membrane trafficking [BR:
tty04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
137171496 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
137171496
NCBI-ProteinID:
XP_067431549
LinkDB
All DBs
Position
20:complement(16090289..16095560)
Genome browser
AA seq
468 aa
AA seq
DB search
MSHSKPLLIPWLRAQIDSGSYHGVHWTNQERTEFCIPWKHGLRQDSSDSDILIFKAWAEA
SGNGPAQGDPSVWKRNFRSALRAKGFKMLADKKNDSANPHKVYSWPEESASGANSSAGSQ
DQDEAEFVLPVQEVSDCSQVVPNLTKLEDCLFLPEEAIYLESTVNQDILQECLEGLNIGP
ETEDTAGFNAPPGQQQLENQVLIGAHVLPGQQQCPVTFEVAVSEAGLPEQPAHPMVGAVG
EACGGQFVEQFIDTMNKTNDRDHFKTQFRVSVFYRGVKVSEQVVENEAGVRLVYRPELTG
PIFDHESGLSVLSLPSPGAMLDQTQAKLTQRILDKLGDGLDVGVSGHVVYGQRRGEIKAF
WSFSKFDQSGQPQEISKLQPQPLYLFKDFLRGIMEFIEGKESYPCSLFFCLGEKWPDPDN
RPWEKKLITVEVVLTSLELLKNMAVVGGASSLQSVELQMSLEEMMEMC
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattctaaaccactgctcatcccgtggctgcgggcccagattgacagcggcagc
tatcacggtgtccactggacgaaccaggagcgaacagagttctgcatcccctggaaacac
ggtttgagacaggactcctccgacagtgacatcctcatctttaaggcctgggcagaggcc
agtggcaatggcccggctcagggagacccctcggtctggaagaggaacttccgcagcgcc
cttcgagccaaaggcttcaaaatgctcgctgacaagaagaacgactccgcaaacccacac
aaagtgtactcctggccagaggagtcagcatcaggagcaaactcttctgctggatcccaa
gaccaagatgaggctgaatttgtccttcctgtacaagaagtaagcgactgtagccaggtt
gttccaaacttgacgaaacttgaagactgtctctttcttccagaagaagccatatattta
gaatccactgtcaaccaggatattctccaggagtgtctagagggactgaacattgggcct
gaaacagaggacacggcaggcttcaacgctcctcctgggcaacagcagctggaaaatcag
gttttgattggtgcacacgtgttgcctgggcaacagcagtgtccagtaacgtttgaggtt
gcagtcagtgaagctgggttgcctgagcaaccagcacatccaatggtgggagctgtggga
gaggcctgtggtgggcagttcgtggagcagttcatagataccatgaacaagaccaatgac
agagaccatttcaagactcagttcagggtatctgtgttctacagaggtgtgaaggtgtct
gagcaggtggttgagaatgaagctggagtccgcttagtttacaggcctgaactcaccggg
ccaatttttgaccacgagtcaggcctgtccgtgctctcgctgccaagtcctggagccatg
ctggatcaaacccaagccaaactgacccaacgcatcctggacaagctgggcgatggtttg
gatgtgggggtgtctggtcatgtggtctacggccagcgacggggtgagatcaaagctttt
tggagcttctctaagtttgaccagagcgggcagccccaagagatttctaaactgcagcct
caaccgctctacctgttcaaggactttttgcgaggaataatggagtttattgaggggaaa
gagagctatccctgctccttgttcttctgcctcggggagaagtggcctgaccctgacaac
aggccttgggagaagaaactcatcacagtggaggtggtcctgacttcactggagttactg
aagaatatggctgttgtaggcggcgcctcctccttgcagtctgtagagctgcagatgtcc
ctcgaagagatgatggagatgtgctga
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integrated database retrieval system
