Thunnus thynnus (Atlantic bluefin tuna): 137176232
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Entry
137176232 CDS
T11154
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
tty Thunnus thynnus (Atlantic bluefin tuna)
Pathway
tty04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tty00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
137176232 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tty03000
]
137176232 (irf5)
Transcription factors [BR:
tty03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
137176232 (irf5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
137176232
NCBI-ProteinID:
XP_067438493
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Position
23:26688456..26697699
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AA seq
478 aa
AA seq
DB search
MSVQPRRIRLKPWLLAQVNSSRYPGLQWLNSDQRLFQIPWKHATRHTPTSEEENTIFKAW
ALETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCDQPPNA
EAAEDDEDEMPNLMDLTINPRISDSFTSFPAHSDMSQFTSTNGTFGPPHVIPVPLHPMTP
DLPMTSDLPQQDFQPQGQMVDQGSFVQDLNSLPPPAALAPMEAGTIGVQNQSCKYDLLSS
IPLTDLDLKFQYRGRPMGSLTVSNPQGCRLYFGHLEPSPERVELFGPITLQQVRFPGTAE
IQNQKQRFYTEALLDVMDRGLILEIWEQDIYAVRLCQCKVFWSGPGILEQGPPNPMEREK
KIKVFSLNDFLQGLILFQRGEAPNPPPFEIYFCFGEDWPDKKPKEKKLIIVQVVPVVARI
LTEMFSGELNWSTDSIRLQISNPDVKDQTVEQFKELQRLLQSQNIQGPWTPNGPSTGL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccggaggatccgtctgaaaccctggctgctggctcaggtgaacagc
agcaggtatcctggtctacagtggctcaattcagaccagcgactcttccagatcccctgg
aaacacgcaacacgccacacgccaacgtccgaggaggaaaacaccatcttcaaggcgtgg
gctctggaaacaggtaaatatcaggaaggtgtggacgagcccgaccctgccaagtggaaa
gcgaaccttcgctgtgccctcaacaagagccgagagtttcagctgaagtacgacggaacg
aaggagactccggtccaaccgtacaagatctacgaggtctgtgatcagccccccaacgca
gaagctgctgaagacgatgaagatgagatgccgaatctgatggacctcacgatcaacccc
aggatcagtgactccttcacctccttcccggctcacagtgacatgagccagttcacttcc
accaacgggaccttcggacctccacacgtcatccccgtaccgctacaccccatgacccct
gacctccccatgacctctgacctccctcagcaggacttccagcctcagggccagatggtg
gatcaggggagcttcgtccaagacctgaactccttgccccccccggctgccttggccccg
atggaggccggcacgattggggtccagaaccagtcctgcaagtacgacctcctgagcagc
atcccactaacggatctcgacctgaagttccagtaccgcggccggccaatgggctctctg
actgtcagtaaccctcagggctgccggctgtacttcggacacctggagccgtctccggag
cgggtggaactgttcggacccatcaccctgcagcaggtccggtttccagggacggctgag
atccagaatcagaagcagcggttctacactgaggccctgctggacgtaatggaccgtggc
ctgatccttgagatctgggagcaagacatctacgcagtccgcctttgtcagtgcaaagtg
ttctggtctggaccgggcatactcgaacagggtcctccaaatcccatggagagagagaag
aagatcaaagtgttcagcctcaacgacttcctgcaagggctgatcttgttccagaggggc
gaagcgccgaaccctccgccctttgagatctacttctgtttcggggaggactggcccgac
aagaaacccaaagagaagaaactcatcatcgtgcaggtggttcctgttgtggctcggatc
ctcacagagatgttctctggagaactcaactggtccacagacagcatccggctgcagatc
tcaaacccggacgtgaaggaccagacggtagaacagttcaaggagcttcagaggctcctg
cagagtcaaaacatccaggggccctggaccccaaacggcccctcaacaggactctga
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